RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 PPA2Q9H2U2 334 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 MMP26Q9NRE1 261 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 JPT1Q9UK76 154 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 POMT1Q9Y6A1 747 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 MEIKINA0A087WXM9 373 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 IGHV1-69DA0A0B4J2H0 117 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 VGLL3A8MV65 326 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 MFNGO00587 321 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 FCN3O75636 299 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 IGHV1-69P01742 117 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 FBP1P09467 338 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 CD3GP09693 182 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 PTBP1P26599 531 aaKnown RBP eCLIP6.94□□□□□ -1.34e-6■■■■□ 25.5
PDGFC-205ENST00000506880 RAB7AP51149 207 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 OR10A3P58181 314 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 GMFBP60983 142 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 SCN1BQ07699 218 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 AESQ08117 197 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 HNRNPA0Q13151 305 aaKnown RBP6.94□□□□□ -1.3
PDGFC-205ENST00000506880 PLA1AQ53H76 456 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 IDNKQ5T6J7 187 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 HES5Q5TA89 166 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 HACD4Q5VWC8 232 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 ZNF626Q68DY1 528 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 RNF144BQ7Z419 303 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 TRAPPC6BQ86SZ2 158 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 LDLRAD3Q86YD5 345 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 CLVS1Q8IUQ0 354 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-205ENST00000506880 C11orf42Q8N5U0 333 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 Q8N7P7 452 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 MAPK1IP1LQ8NDC0 245 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 OR5R1Q8NH85 324 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 EDARADDQ8WWZ3 215 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 GALMQ96C23 342 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 ISOC1Q96CN7 298 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 MALSU1Q96EH3 234 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 TBX15Q96SF7 602 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 PCGF1Q9BSM1 259 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 CLEC7AQ9BXN2 247 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 TMEM133Q9H2Q1 129 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 BANF2Q9H503 90 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 SCPEP1Q9HB40 452 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 C19orf12Q9NSK7 152 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 ONECUT1Q9UBC0 465 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 IL36RNQ9UBH0 155 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 RSL24D1Q9UHA3 163 aaKnown RBP6.94□□□□□ -1.3
PDGFC-205ENST00000506880 ZNF107Q9UII5 783 aaPredicted RBP6.94□□□□□ -1.3
PDGFC-205ENST00000506880 KIF25Q9UIL4 384 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 TRAPPC2LQ9UL33 140 aa6.94□□□□□ -1.3
PDGFC-205ENST00000506880 ODF3BA8MYP8 253 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 YPEL1O60688 119 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 SLC22A5O76082 557 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 SELLP14151 372 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 EPHA1P21709 976 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 IL3RAP26951 378 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 DUSP1P28562 367 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 TALDO1P37837 337 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 GLIPR1P48060 266 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 VEGFCP49767 419 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 ZNF137PP52743 207 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 LGALS4P56470 323 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 TMEM50BP56557 158 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 VBP1P61758 197 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 NCS1P62166 190 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 ARF6P62330 175 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 EDDM3AQ14507 147 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 HMGN3Q15651 99 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 MSMO1Q15800 293 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 RBMS3Q6XE24 437 aaKnown RBP6.93□□□□□ -1.3
PDGFC-205ENST00000506880 VMO1Q7Z5L0 202 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 BPIFB2Q8N4F0 458 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 OR4A4PQ8NGN8 299 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 OR9G1Q8NH87 305 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 LGALS14Q8TCE9 139 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 DYNC2LI1Q8TCX1 351 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 BORCS5Q969J3 196 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 YPEL2Q96QA6 119 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 CMSS1Q9BQ75 279 aaKnown RBP6.93□□□□□ -1.3
PDGFC-205ENST00000506880 PECRQ9BY49 303 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 MS4A7Q9GZW8 240 aaPredicted RBP6.93□□□□□ -1.3
PDGFC-205ENST00000506880 RBM38Q9H0Z9 239 aaKnown RBP6.93□□□□□ -1.3
PDGFC-205ENST00000506880 MEGF9Q9H1U4 602 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 ATG5Q9H1Y0 275 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 MMP27Q9H306 513 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 DPAGT1Q9H3H5 408 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 RAB18Q9NP72 206 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 CALYQ9NYX4 217 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 IDI2-AS1Q9NZ38 188 aa6.93□□□□□ -1.3
PDGFC-205ENST00000506880 ATRQ13535 2644 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 ZFHX3Q15911 3703 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 CENPVL3A0A0U1RRI6 287 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 A0A1B0GW55 424 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 A0A1W2PP11 408 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 INAFM1C9JVW0 142 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 H3BMQ9 156 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 C15orf65H3BRN8 121 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 NPFFO15130 113 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 IGLV1-47P01700 117 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 DUX4L2P0CJ85 424 aa6.92□□□□□ -1.3
PDGFC-205ENST00000506880 DUX4L3P0CJ86 424 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms