RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 MMP23AO75900 390 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 APOA1P02647 267 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 EIF4EP06730 217 aaKnown RBP10.51□□□□□ -0.73
TCOF1-210ENST00000506767 IGHV1-8P0DP01 117 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 CDK2P24941 298 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 GLP1RP43220 463 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 DLX1P56177 255 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 KRTAP21-3Q3LHN1 58 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 CDNFQ49AH0 187 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 HEPN1Q6WQI6 88 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 IL17RELQ6ZVW7 336 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 NANPQ8TBE9 248 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 MRGPRDQ8TDS7 321 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 CCDC107Q8WV48 283 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 S100A16Q96FQ6 103 aaKnown RBP10.51□□□□□ -0.73
TCOF1-210ENST00000506767 HDHD3Q9BSH5 251 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-210ENST00000506767 NXF2Q9GZY0 626 aaKnown RBP10.51□□□□□ -0.73
TCOF1-210ENST00000506767 ZMAT3Q9HA38 289 aaKnown RBP10.51□□□□□ -0.73
TCOF1-210ENST00000506767 DIABLOQ9NR28 239 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 SIRT7Q9NRC8 400 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 CALYQ9NYX4 217 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 TRAPPC2LQ9UL33 140 aa10.51□□□□□ -0.73
TCOF1-210ENST00000506767 NF1P21359 2839 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 A0A075B6Q4 140 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 RNASEK-C17orf49H0YIS7 233 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 HPGDSO60760 199 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 CRLF1O75462 422 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 CLPXO76031 633 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 MELTFP08582 738 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 GSTP1P09211 210 aaKnown RBP10.5□□□□□ -0.73
TCOF1-210ENST00000506767 IGHV4-38-2P0DP08 117 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 RCC1P18754 421 aaPredicted RBP10.5□□□□□ -0.73
TCOF1-210ENST00000506767 ELK1P19419 428 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 HNF1AP20823 631 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 GDNFP39905 211 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 TRAT1Q6PIZ9 186 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 ZNF554Q86TJ5 538 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 OR10A7Q8NGE5 316 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 LHX4Q969G2 390 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 PHF21AQ96BD5 680 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 CMSS1Q9BQ75 279 aaKnown RBP10.5□□□□□ -0.73
TCOF1-210ENST00000506767 BEX2Q9BXY8 128 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 C12orf4Q9NQ89 552 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 ELF5Q9UKW6 265 aaPredicted RBP10.5□□□□□ -0.73
TCOF1-210ENST00000506767 SESN1Q9Y6P5 492 aa10.5□□□□□ -0.73
TCOF1-210ENST00000506767 KIAA2026Q5HYC2 2103 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 TRAV18A0A075B6X5 111 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 A0A087X0M5 115 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 TRAV40A0A0B4J280 105 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 A0A1B0GX30 115 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 C12orf77C9JDV5 145 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 CTDSP2O14595 271 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 OMGP23515 440 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 SSTR5P35346 364 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 BPIFB3P59826 476 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 PRB3Q04118 309 aaPredicted RBP10.49□□□□□ -0.73
TCOF1-210ENST00000506767 HMGN3Q15651 99 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 PNLIPRP3Q17RR3 467 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 TUSC1Q2TAM9 212 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 CHRFAM7AQ494W8 412 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 C6orf183Q5T699 404 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 PRAMEF5Q5TYX0 476 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 HACD4Q5VWC8 232 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 NCR3LG1Q68D85 454 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 KIRREL1Q96J84 757 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 MIXL1Q9H2W2 232 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 HEXA-AS1Q9H8Q6 139 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 Q9N2K0 584 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 IDI2-AS1Q9NZ38 188 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 NUP50Q9UKX7 468 aa10.49□□□□□ -0.73
TCOF1-210ENST00000506767 NIPBLQ6KC79 2804 aaeCLIP10.49□□□□□ -0.73
TCOF1-210ENST00000506767 IGHV1-69DA0A0B4J2H0 117 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 TMEM235A6NFC5 223 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 F2RL2O00254 374 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 IGHV1-69P01742 117 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 CD3GP09693 182 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 CD34P28906 385 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 UBE2E1P51965 193 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 GUCA2AQ02747 115 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 KLRD1Q13241 179 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 SRSF7Q16629 238 aaKnown RBP eCLIP10.48□□□□□ -0.73
TCOF1-210ENST00000506767 GPR157Q5UAW9 335 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 OR52W1Q6IF63 320 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 BAIAP2L2Q6UXY1 529 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 ZNF782Q6ZMW2 699 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-210ENST00000506767 C9orf139Q6ZV77 190 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 MOB1BQ7L9L4 216 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 OR11H6Q8NGC7 330 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 RFESDQ8TAC1 157 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 ARL11Q969Q4 196 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 DCUN1D5Q9BTE7 237 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 TMEM133Q9H2Q1 129 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 AUNIPQ9H7T9 357 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 TAF9BQ9HBM6 251 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 CHMP1AQ9HD42 196 aaPredicted RBP10.48□□□□□ -0.73
TCOF1-210ENST00000506767 KCNIP1Q9NZI2 227 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 MGAT4AQ9UM21 535 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 A3GALT2U3KPV4 340 aa10.48□□□□□ -0.73
TCOF1-210ENST00000506767 HIVEP2P31629 2446 aa10.47□□□□□ -0.73
TCOF1-210ENST00000506767 IGHV3OR16-10A0A075B7F0 116 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms