RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 ANXA2RQ3ZCQ2 193 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 ZSCAN4Q8NAM6 433 aaPredicted RBP4.91□□□□□ -1.62
SCLT1-207ENST00000506233 OR5D18Q8NGL1 313 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 OR1S1Q8NH92 325 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 S100A16Q96FQ6 103 aaKnown RBP4.91□□□□□ -1.62
SCLT1-207ENST00000506233 SLA2Q9H6Q3 261 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 CACNA1HO95180 2353 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 COX5BP10606 129 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 LIPCP11150 499 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 SSTR2P30874 369 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 BMI1P35226 326 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 Q6ZS92 163 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 Q8N7P7 452 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 ZNF680Q8NEM1 530 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 OR2AK2Q8NG84 335 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 C18orf12Q96KH6 178 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 MICU1Q9BPX6 476 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 ZNF71Q9NQZ8 489 aaPredicted RBP4.91□□□□□ -1.62
SCLT1-207ENST00000506233 GPR173Q9NS66 373 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 ZANQ9Y493 2812 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 A0A0G2JRQ6 117 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 CRTAPO75718 401 aaPredicted RBP4.91□□□□□ -1.62
SCLT1-207ENST00000506233 TMEM50AO95807 157 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 FCGR3AP08637 254 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 PRKAR1AP10644 381 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 ADCYAP1P18509 176 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 GDF1P27539 372 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 OC90Q02509 493 aaPredicted RBP4.91□□□□□ -1.62
SCLT1-207ENST00000506233 TMEM268Q5VZI3 342 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 SLC25A25Q6KCM7 469 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 POC1AQ8NBT0 407 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 OR5M8Q8NGP6 311 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 FAM71F1Q96KD3 344 aaPredicted RBP4.91□□□□□ -1.62
SCLT1-207ENST00000506233 FAAP24Q9BTP7 215 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 COMMD4Q9H0A8 199 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 ATG5Q9H1Y0 275 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 MRPS28Q9Y2Q9 187 aaKnown RBP4.91□□□□□ -1.62
SCLT1-207ENST00000506233 FAM172BPA6NC97 362 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 TEX46H3BTG2 121 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 HLA-DQA2P01906 255 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 PMP2P02689 132 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 ASCL1P50553 236 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 MRPS10P82664 201 aaKnown RBP4.9□□□□□ -1.62
SCLT1-207ENST00000506233 PITPNAQ00169 270 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 FOXL1Q12952 345 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 ACSF3Q4G176 576 aaPredicted RBP4.9□□□□□ -1.62
SCLT1-207ENST00000506233 Q6ZRM9 215 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 TRAPPC6BQ86SZ2 158 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 MRPL30Q8TCC3 161 aaKnown RBP4.9□□□□□ -1.62
SCLT1-207ENST00000506233 PIGTQ969N2 578 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 CXorf58Q96LI9 332 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 ZNF488Q96MN9 340 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 SPAG8Q99932 426 aaPredicted RBP4.9□□□□□ -1.62
SCLT1-207ENST00000506233 TOLLIPQ9H0E2 274 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 DKKL1Q9UK85 242 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 TNFSF18Q9UNG2 199 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 RFNGQ9Y644 331 aa4.9□□□□□ -1.62
SCLT1-207ENST00000506233 FAM240BA0A1B0GVZ2 78 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 SGCEO43556 437 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 LHBP01229 141 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 WNT2P09544 360 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 CGB3P0DN86 165 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 CGB7P0DN87 165 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 MGMTP16455 207 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 BCL3P20749 454 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 IER3P46695 156 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 CSNK2A1P68400 391 aaPredicted RBP4.9□□□□□ -1.63
SCLT1-207ENST00000506233 EXOSC2Q13868 293 aaKnown RBP4.9□□□□□ -1.63
SCLT1-207ENST00000506233 ZNF782Q6ZMW2 699 aaPredicted RBP4.9□□□□□ -1.63
SCLT1-207ENST00000506233 MDP1Q86V88 176 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 STPG2Q8N412 459 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 PXT1Q8NFP0 134 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 LYPD6BQ8NI32 183 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 JSRP1Q96MG2 331 aaPredicted RBP4.9□□□□□ -1.63
SCLT1-207ENST00000506233 RBM24Q9BX46 236 aaKnown RBP4.9□□□□□ -1.63
SCLT1-207ENST00000506233 ULBP2Q9BZM5 246 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 SELENOIQ9C0D9 397 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 EXO5Q9H790 373 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 TMEM100Q9NV29 134 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 EMC3Q9P0I2 261 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 INTS1Q8N201 2190 aaKnown RBP4.9□□□□□ -1.63
SCLT1-207ENST00000506233 TRBV6-6A0A0A6YYG2 114 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 IGHV1-18A0A0C4DH31 117 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 ZNF736B4DX44 427 aaPredicted RBP4.9□□□□□ -1.63
SCLT1-207ENST00000506233 C9J4A7 227 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 F5H5K5 113 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 NMBP08949 121 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 RAB3AP20336 220 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 GNRHRP30968 328 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 RBMS2Q15434 407 aaKnown RBP4.9□□□□□ -1.63
SCLT1-207ENST00000506233 SRSF7Q16629 238 aaKnown RBP eCLIP4.9□□□□□ -1.63
SCLT1-207ENST00000506233 MRGPRG-AS1Q2M3A8 158 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 PDLIM3Q53GG5 364 aaPredicted RBP4.9□□□□□ -1.63
SCLT1-207ENST00000506233 CLEC18BQ6UXF7 455 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 FBXW12Q6X9E4 464 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 FAM220AQ7Z4H9 259 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 TSEN15Q8WW01 171 aaKnown RBP4.9□□□□□ -1.63
SCLT1-207ENST00000506233 PCNPQ8WW12 178 aaKnown RBP4.9□□□□□ -1.63
SCLT1-207ENST00000506233 PP6455Q8WZ26 134 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 ZNF503Q96F45 646 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms