RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 PAN3Q58A45 887 aaKnown RBP5.99□□□□□ -1.45
NUP54-204ENST00000506098 ATAD3CQ5T2N8 411 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 OLFML2AQ68BL7 652 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 ZNF880Q6PDB4 577 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 CLEC2AQ6UVW9 174 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 FAM131AQ6UXB0 335 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 LYPD2Q6UXB3 125 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 ZNF841Q6ZN19 808 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 ZNF497Q6ZNH5 498 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 RTN4RL2Q86UN3 420 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 IZUMO1Q8IYV9 350 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 SPICQ8N5J4 248 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 GDPD1Q8N9F7 314 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 DTX3Q8N9I9 347 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 ZNRF1Q8ND25 227 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 OR4S1Q8NGB4 309 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 OR4M2Q8NGB6 313 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 PPP1R35Q8TAP8 253 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 GPX8Q8TED1 209 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 FAM216AQ8WUB2 273 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 PERPQ96FX8 193 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 CCL13Q99616 98 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 SDHCQ99643 169 aaPredicted RBP5.99□□□□□ -1.45
NUP54-204ENST00000506098 OCSTAMPQ9BR26 566 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 PIMREGQ9BSJ6 248 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 FAAP24Q9BTP7 215 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 SRRQ9GZT4 340 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 RIMS4Q9H426 269 aaPredicted RBP5.99□□□□□ -1.45
NUP54-204ENST00000506098 UNKLQ9H9P5 680 aaKnown RBP5.99□□□□□ -1.45
NUP54-204ENST00000506098 PATZ1Q9HBE1 687 aaKnown RBP5.99□□□□□ -1.45
NUP54-204ENST00000506098 IFT46Q9NQC8 304 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 CTSZQ9UBR2 303 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 AK3Q9UIJ7 227 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 ELF5Q9UKW6 265 aaPredicted RBP5.99□□□□□ -1.45
NUP54-204ENST00000506098 ANAPC10Q9UM13 185 aa5.99□□□□□ -1.45
NUP54-204ENST00000506098 A0A1B0GW55 424 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 UBE2QL1A1L167 161 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 MEIOCA2RUB1 952 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 LINC00862A6NCI5 91 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 TMEM235A6NFC5 223 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 CEACAM18A8MTB9 384 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 GABARAPH6UMI1 98 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 H7C1Q1 480 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 TMPRSS2O15393 492 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 ADAM20O43506 726 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 CCNKO75909 580 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 TFF1P04155 84 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 IFNA4P05014 189 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 DUX4L2P0CJ85 424 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 DUX4L3P0CJ86 424 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 DUX4L4P0CJ87 422 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 DUX4L5P0CJ88 424 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 DUX4L6P0CJ89 424 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 DUX4L7P0CJ90 424 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 SMIM6P0DI80 62 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 SLC25A16P16260 332 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 DTYMKP23919 212 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 S100PP25815 95 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 NPY4RP50391 375 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 LMO4P61968 165 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 SSBP1Q04837 148 aaKnown RBP5.98□□□□□ -1.45
NUP54-204ENST00000506098 CLEC12BQ2HXU8 276 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 CR1LQ2VPA4 569 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 NKAPLQ5M9Q1 402 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 AVPI1Q5T686 147 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 RSBN1Q5VWQ0 802 aaPredicted RBP5.98□□□□□ -1.45
NUP54-204ENST00000506098 SLC35E4Q6ICL7 350 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 BRICD5Q6PL45 260 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 DUX4L9Q6RFH8 374 aaPredicted RBP5.98□□□□□ -1.45
NUP54-204ENST00000506098 ETV3LQ6ZN32 361 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 Q6ZS49 121 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 KRTAP1-3Q8IUG1 177 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 BPIFB2Q8N4F0 458 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 FAM216BQ8N7L0 139 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 PLPPR1Q8TBJ4 325 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 SMIM4Q8WVI0 70 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 NEIL1Q96FI4 390 aaPredicted RBP5.98□□□□□ -1.45
NUP54-204ENST00000506098 COQ2Q96H96 371 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 CYYR1Q96J86 154 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 C12orf57Q99622 126 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 CMSS1Q9BQ75 279 aaKnown RBP5.98□□□□□ -1.45
NUP54-204ENST00000506098 ZNF251Q9BRH9 671 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 BPESC1Q9GZL8 116 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 CHST6Q9GZX3 395 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 ZMAT3Q9HA38 289 aaKnown RBP5.98□□□□□ -1.45
NUP54-204ENST00000506098 MBNL3Q9NUK0 354 aaKnown RBP5.98□□□□□ -1.45
NUP54-204ENST00000506098 DUX4Q9UBX2 424 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 MTFP1Q9UDX5 166 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 MRPS7Q9Y2R9 242 aaKnown RBP5.98□□□□□ -1.45
NUP54-204ENST00000506098 RBMX2Q9Y388 322 aaKnown RBP5.98□□□□□ -1.45
NUP54-204ENST00000506098 SESN1Q9Y6P5 492 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 MYO9AB2RTY4 2548 aa5.98□□□□□ -1.45
NUP54-204ENST00000506098 ZNF469Q96JG9 3925 aaPredicted RBP5.98□□□□□ -1.45
NUP54-204ENST00000506098 MAP1AP78559 2803 aaPredicted RBP5.98□□□□□ -1.45
NUP54-204ENST00000506098 ITPR3Q14573 2671 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 IGHV4-30-2A0A087WSY4 118 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 A0A096LNT2 108 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 CENPXA8MT69 81 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 DVL1O14640 695 aa5.97□□□□□ -1.45
NUP54-204ENST00000506098 NDUFB3O43676 98 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms