RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 CACNG8Q8WXS5 425 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 IFT81Q8WYA0 676 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 GTF2H4Q92759 462 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 HIST1H2BAQ96A08 127 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 CLDN23Q96B33 292 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 CMBLQ96DG6 245 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 FMC1Q96HJ9 113 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 CPB2Q96IY4 423 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 ZNF396Q96N95 335 aaPredicted RBP0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 BIRC8Q96P09 236 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 GOLPH3Q9H4A6 298 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 POMKQ9H5K3 350 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 TMBIM4Q9HC24 238 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 FAM206AQ9NX38 181 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 TAS2R9Q9NYW1 312 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 SLC23A2Q9UGH3 650 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 VPREB3Q9UKI3 123 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 USH1CQ9Y6N9 552 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 TNIKQ9UKE5 1360 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 COL18A1P39060 1754 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 NYNRINQ9P2P1 1898 aaKnown RBP0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 DSCAML1Q8TD84 2053 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 MALRD1Q5VYJ5 2156 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 DNMT1P26358 1616 aaKnown RBP0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 SLIT2O94813 1529 aa0.64□□□□□ -2.31
HMGB1P29-201ENST00000505659 TRAV8-2A0A0B4J237 113 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 MGAT4DA6NG13 374 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 ARGFXA6NJG6 315 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 FAM183AA6NL82 134 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 RNASEK-C17orf49H0YIS7 233 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 TMEM250H0YL14 139 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 H3BP45 60 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 EEF1E1O43324 174 aaKnown RBP0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 PDCD6O75340 191 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 SC5DO75845 299 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 CA2P00918 260 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 AKR1C4P17516 323 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 M6PRP20645 277 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 CRABP1P29762 137 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 UGT2B10P36537 528 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 HSPA13P48723 471 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 CARD18P57730 90 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 RHOAP61586 193 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 PRB3Q04118 309 aaPredicted RBP0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 BAXQ07812 192 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 TRAM1Q15629 374 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 CEACAM21Q3KPI0 293 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 C10orf91Q5T1B1 145 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 Q6ZRN7 208 aaPredicted RBP0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 FAM183BPQ6ZVS7 135 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 SLC25A45Q8N413 288 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 C2orf73Q8N5S3 287 aaPredicted RBP0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 TRIML2Q8N7C3 387 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR10P1Q8NGE3 313 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 SPPL2BQ8TCT7 592 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 CCDC124Q96CT7 223 aaKnown RBP0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 DDIT4LQ96D03 193 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 ZMYND19Q96E35 227 aaPredicted RBP0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 MSANTD3Q96H12 275 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR52B2Q96RD2 323 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 LINC01587Q99440 93 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 SUCNR1Q9BXA5 334 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 ARL6Q9H0F7 186 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 KCNIP2Q9NS61 270 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 RMND1Q9NWS8 449 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 STMN3Q9NZ72 180 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 POMPQ9Y244 141 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 LINC00588Q9Y4M8 146 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 RGS12O14924 1447 aa0.63□□□□□ -2.31
HMGB1P29-201ENST00000505659 IGHV3OR15-7A0A075B7D8 119 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 NDUFS8O00217 210 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 PSMD11O00231 422 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 PLPP3O14495 311 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 FABP7O15540 132 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 DENRO43583 198 aaKnown RBP0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 CYTH3O43739 400 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 APOA1P02647 267 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 S100A9P06702 114 aaKnown RBP0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 IVLP07476 585 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 SPNP16150 400 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 INPP1P49441 399 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 AKR1C2P52895 323 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 PLTPP55058 493 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 ATP5J2P56134 94 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 TNNC1P63316 161 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 PRDX1Q06830 199 aaKnown RBP0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 PAFAH1B3Q15102 231 aaKnown RBP0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 C18orf21Q32NC0 220 aaPredicted RBP0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 FAM162BQ5T6X4 162 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 ELP2Q6IA86 826 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 DGAT2L6Q6ZPD8 337 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 MRPL52Q86TS9 123 aaKnown RBP0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 LRRC6Q86X45 466 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 KRTCAP2Q8N6L1 136 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 ZIC4Q8N9L1 334 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR11G2Q8NGC1 345 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR4C16Q8NGL9 310 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 OR4A5Q8NH83 315 aa0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 PDCD6IPQ8WUM4 868 aaKnown RBP0.62□□□□□ -2.31
HMGB1P29-201ENST00000505659 KCTD4Q8WVF5 259 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms