RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 IGHV3-7P01780 117 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 CGB3P0DN86 165 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 CGB7P0DN87 165 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 NFYBP25208 207 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 DUSP1P28562 367 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 F2RL1P55085 397 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 CBX1P83916 185 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 TSPAN31Q12999 210 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 CLVS2Q5SYC1 327 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 SLX4IPQ5VYV7 408 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 ETFRF1Q6IPR1 90 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 IL34Q6ZMJ4 242 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 SHFQ7M4L6 423 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 TMEM104Q8NE00 496 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 OR4D6Q8NGJ1 314 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 OTOSQ8NHW6 89 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 OR51E1Q8TCB6 317 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 SLAMF9Q96A28 289 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 CADM1Q9BY67 442 aaKnown RBP5.28□□□□□ -1.56
VCAN-206ENST00000505615 C11orf54Q9H0W9 315 aaPredicted RBP5.28□□□□□ -1.56
VCAN-206ENST00000505615 MED20Q9H944 212 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 PLEKHA3Q9HB20 300 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 GPR84Q9NQS5 396 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 CMTM6Q9NX76 183 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 TAS2R1Q9NYW7 299 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 PSG11Q9UQ72 335 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 MRPS28Q9Y2Q9 187 aaKnown RBP5.28□□□□□ -1.56
VCAN-206ENST00000505615 WSB1Q9Y6I7 421 aa5.28□□□□□ -1.56
VCAN-206ENST00000505615 UBR4Q5T4S7 5183 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 IZUMO1RA6ND01 250 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 PRSS29PA6NIE9 313 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 ZNF729A6NN14 1252 aaPredicted RBP5.27□□□□□ -1.57
VCAN-206ENST00000505615 PRR32B1ATL7 298 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 SIRPB1O00241 398 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 DLGAP1O14490 977 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 HSD17B6O14756 317 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 MRASO14807 208 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 ATP6V0E1O15342 81 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 SOX15O60248 233 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 SELENOFO60613 162 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 NPPAP01160 153 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 LYNP07948 512 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 SOX6P35712 828 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 NPBWR2P48146 333 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 REG1BP48304 166 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 BLVRAP53004 296 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 AESQ08117 197 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 MFGE8Q08431 387 aaPredicted RBP5.27□□□□□ -1.57
VCAN-206ENST00000505615 ZNF146Q15072 292 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 COQ5Q5HYK3 327 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 Q6ZSR3 168 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 LINC00336Q6ZUF6 198 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 GTSCR1Q86UQ5 136 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 COMMD2Q86X83 199 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.27□□□□□ -1.57
VCAN-206ENST00000505615 MINDY2Q8NBR6 621 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 OR52L1Q8NGH7 329 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 OR5AN1Q8NGI8 311 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 OR2T10Q8NGZ9 312 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 EMG1Q92979 244 aaKnown RBP5.27□□□□□ -1.57
VCAN-206ENST00000505615 RASL11BQ9BPW5 248 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 OVOL2Q9BRP0 275 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 ELOVL1Q9BW60 279 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 PBOV1Q9GZY1 135 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 WFDC10AQ9H1F0 79 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 RBFOX1Q9NWB1 397 aaKnown RBP5.27□□□□□ -1.57
VCAN-206ENST00000505615 CHCHD3Q9NX63 227 aaKnown RBP5.27□□□□□ -1.57
VCAN-206ENST00000505615 IL20Q9NYY1 176 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 SIGLEC8Q9NYZ4 499 aa5.27□□□□□ -1.57
VCAN-206ENST00000505615 ZNF107Q9UII5 783 aaPredicted RBP5.27□□□□□ -1.57
VCAN-206ENST00000505615 KLK5Q9Y337 293 aaPredicted RBP5.27□□□□□ -1.57
VCAN-206ENST00000505615 FAM32AQ9Y421 112 aaKnown RBP5.27□□□□□ -1.57
VCAN-206ENST00000505615 TRBV2A0A0J9YWF9 115 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 KBTBD11-OT1A0A1B0GTJ5 212 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 ACOD1A6NK06 481 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 ZNF736B4DX44 427 aaPredicted RBP5.26□□□□□ -1.57
VCAN-206ENST00000505615 H0Y980 276 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 MOSP00540 346 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 TTRP02766 147 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 HSPB1P04792 205 aaKnown RBP5.26□□□□□ -1.57
VCAN-206ENST00000505615 CSN2P05814 226 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 GNG10P50151 68 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 SLC25A26Q70HW3 274 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 MOB3BQ86TA1 216 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 SLC15A3Q8IY34 581 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 ENTHD1Q8IYW4 607 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 TMEM116Q8NCL8 245 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 HAVCR2Q8TDQ0 301 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 GNPDA2Q8TDQ7 276 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 ABHD5Q8WTS1 349 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 THEM6Q8WUY1 208 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 OSBPL10Q9BXB5 764 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 PPIL3Q9H2H8 161 aaKnown RBP5.26□□□□□ -1.57
VCAN-206ENST00000505615 CCDC134Q9H6E4 229 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 LINC00574Q9H8X3 128 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 NKIRAS1Q9NYS0 192 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 NUFIP1Q9UHK0 495 aaKnown RBP5.26□□□□□ -1.57
VCAN-206ENST00000505615 GLS2Q9UI32 602 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 V9GYS6 101 aa5.26□□□□□ -1.57
VCAN-206ENST00000505615 IGHV7-81A0A0B4J1V7 117 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms