RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 STPG2Q8N412 459 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 KLHL30-AS1Q8NEE0 82 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 OR52N1Q8NH53 320 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 GPR148Q8TDV2 347 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 EAF1Q96JC9 268 aaPredicted RBP9.62□□□□□ -0.87
SNHG4-202ENST00000505522 DUX3Q96PT4 197 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 P2RX4Q99571 388 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 C9orf16Q9BUW7 83 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 METTL9Q9H1A3 318 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 FGF20Q9NP95 211 aaPredicted RBP9.62□□□□□ -0.87
SNHG4-202ENST00000505522 ZFP57Q9NU63 452 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 IL36GQ9NZH8 169 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 SIRT4Q9Y6E7 314 aaPredicted RBP9.62□□□□□ -0.87
SNHG4-202ENST00000505522 IGHV3-43A0A0B4J1X8 118 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 A0A1W2PP11 408 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 TMEM30CPA0ZSE6 113 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 NCBP2LA6PVI3 153 aaKnown RBP9.61□□□□□ -0.87
SNHG4-202ENST00000505522 CCRL2O00421 344 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 SDCBPO00560 298 aaPredicted RBP9.61□□□□□ -0.87
SNHG4-202ENST00000505522 WBP4O75554 376 aaKnown RBP9.61□□□□□ -0.87
SNHG4-202ENST00000505522 GAPDHP04406 335 aaKnown RBP9.61□□□□□ -0.87
SNHG4-202ENST00000505522 CD2P06729 351 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 IGHV3-43DP0DP04 118 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 GZMHP20718 246 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 SERPINA2P20848 420 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 ZNF93P35789 620 aaPredicted RBP9.61□□□□□ -0.87
SNHG4-202ENST00000505522 MYCNOSP40205 109 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 SLC35B1P78383 322 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 CCDC58Q4VC31 144 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 OR2G6Q5TZ20 316 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 LCNL1Q6ZST4 164 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 FOXRED2Q8IWF2 684 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 IZUMO1Q8IYV9 350 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 Q8N6K4 173 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 OR52M1Q8NGK5 317 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 OR13C5Q8NGS8 318 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 CCDC107Q8WV48 283 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 DPF1Q92782 380 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 ARL11Q969Q4 196 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 RBMXL1Q96E39 390 aaKnown RBP9.61□□□□□ -0.87
SNHG4-202ENST00000505522 GPR61Q9BZJ8 451 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 TMEM138Q9NPI0 162 aa9.61□□□□□ -0.87
SNHG4-202ENST00000505522 NBEAL2Q6ZNJ1 2754 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 MAGEA13PA6NCF6 341 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 OGG1O15527 345 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 LALBAP00709 142 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 CSTBP04080 98 aaKnown RBP9.6□□□□□ -0.87
SNHG4-202ENST00000505522 BDKRB2P30411 391 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 SLC6A1P30531 599 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 GPR12P47775 334 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 PPP3R1P63098 170 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 CD69Q07108 199 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 SLC22A6Q4U2R8 563 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 ATAD3CQ5T2N8 411 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 ZNF497Q6ZNH5 498 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 LINC00596Q86U02 117 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 TGIF2LXQ8IUE1 241 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 ZNF695Q8IW36 515 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 LINC00311Q8N616 119 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 COMMD1Q8N668 190 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 Q8N9W7 124 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 TMEM104Q8NE00 496 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 NEK7Q8TDX7 302 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 ST6GALNAC6Q969X2 333 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 RAX2Q96IS3 184 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 MCRIP2Q9BUT9 160 aaKnown RBP9.6□□□□□ -0.87
SNHG4-202ENST00000505522 ABCG5Q9H222 651 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 S100A14Q9HCY8 104 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 GFOD1Q9NXC2 390 aa9.6□□□□□ -0.87
SNHG4-202ENST00000505522 KMT2CQ8NEZ4 4911 aaKnown RBP9.59□□□□□ -0.87
SNHG4-202ENST00000505522 ZNF736B4DX44 427 aaPredicted RBP9.59□□□□□ -0.87
SNHG4-202ENST00000505522 H0YHG0 523 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 AP4M1O00189 453 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 SLC31A2O15432 143 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 ORC5O43913 435 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 MT-ND4P03905 459 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 RPLP1P05386 114 aaKnown RBP9.59□□□□□ -0.87
SNHG4-202ENST00000505522 IGFBP3P17936 291 aaPredicted RBP9.59□□□□□ -0.87
SNHG4-202ENST00000505522 DCKP27707 260 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 MPV17LQ2QL34 196 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 DEFB136Q30KP8 78 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 TEX38Q6PEX7 206 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 PQLC1Q8N2U9 271 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 C8orf31Q8N9H6 132 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 ZNF439Q8NDP4 499 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 OR2T10Q8NGZ9 312 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 RTN4IP1Q8WWV3 396 aaPredicted RBP9.59□□□□□ -0.87
SNHG4-202ENST00000505522 GHSRQ92847 366 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 SMIM19Q96E16 107 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 S100A13Q99584 98 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 ZNF184Q99676 751 aaPredicted RBP9.59□□□□□ -0.87
SNHG4-202ENST00000505522 B9D2Q9BPU9 175 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 DCLRE1BQ9H816 532 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 PLSCR3Q9NRY6 295 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 LIN7CQ9NUP9 197 aaKnown RBP9.59□□□□□ -0.87
SNHG4-202ENST00000505522 PAK1IP1Q9NWT1 392 aaPredicted RBP9.59□□□□□ -0.87
SNHG4-202ENST00000505522 CLEC2DQ9UHP7 191 aa9.59□□□□□ -0.87
SNHG4-202ENST00000505522 TRAV8-7A0A075B6U6 113 aa9.58□□□□□ -0.88
SNHG4-202ENST00000505522 TRBV5-5A0A0J9YX44 114 aa9.58□□□□□ -0.88
SNHG4-202ENST00000505522 C12orf77C9JDV5 145 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms