RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ZNF260Q3ZCT1 412 aa10.87□□□□□ -0.67
PDLIM7-212ENST00000504380 KLF17Q5JT82 389 aaPredicted RBP10.87□□□□□ -0.67
PDLIM7-212ENST00000504380 PNKDQ8N490 385 aa10.87□□□□□ -0.67
PDLIM7-212ENST00000504380 KIR3DL3Q8N743 410 aa10.87□□□□□ -0.67
PDLIM7-212ENST00000504380 AP3S1Q92572 193 aa10.87□□□□□ -0.67
PDLIM7-212ENST00000504380 LHX4Q969G2 390 aa10.87□□□□□ -0.67
PDLIM7-212ENST00000504380 PHF21AQ96BD5 680 aa10.87□□□□□ -0.67
PDLIM7-212ENST00000504380 CMSS1Q9BQ75 279 aaKnown RBP10.87□□□□□ -0.67
PDLIM7-212ENST00000504380 ABCG5Q9H222 651 aa10.87□□□□□ -0.67
PDLIM7-212ENST00000504380 OR6C3Q9NZP0 311 aa10.87□□□□□ -0.67
PDLIM7-212ENST00000504380 UBE2J1Q9Y385 318 aaPredicted RBP10.87□□□□□ -0.67
PDLIM7-212ENST00000504380 KPTNQ9Y664 436 aa10.87□□□□□ -0.67
PDLIM7-212ENST00000504380 C17orf98A8MV24 154 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 M0R1W7 72 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 RGS5O15539 181 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 IGHV3-7P01780 117 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 CD3GP09693 182 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 COX7A1P24310 79 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 PAX5Q02548 391 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 DYNC1I2Q13409 638 aaKnown RBP10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 ARFRP1Q13795 201 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 FAM189A2Q15884 450 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 RUSC1-AS1Q66K80 236 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 LAX1Q8IWV1 398 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 GAPTQ8N292 157 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 PRR18Q8N4B5 295 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 OR1L1Q8NH94 360 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 MCFD2Q8NI22 146 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 NUDCD2Q8WVJ2 157 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 MAFIPQ8WZ33 124 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 GCDHQ92947 438 aaPredicted RBP10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 TNFRSF14Q92956 283 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 ARL11Q969Q4 196 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 UPRTQ96BW1 309 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 S100A16Q96FQ6 103 aaKnown RBP10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 C6orf62Q9GZU0 229 aaPredicted RBP10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 NCOR1P1Q9H4R4 102 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 DIABLOQ9NR28 239 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 TAS2R3Q9NYW6 316 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 CALYQ9NYX4 217 aa10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 ZNF230Q9UIE0 474 aaPredicted RBP10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 NSD1Q96L73 2696 aaPredicted RBP10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 SONP18583 2426 aaKnown RBP10.86□□□□□ -0.67
PDLIM7-212ENST00000504380 IGHV3-43A0A0B4J1X8 118 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 TRAV40A0A0B4J280 105 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 KBTBD11-OT1A0A1B0GTJ5 212 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 A0A1W2PPH5 198 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 ZNF729A6NN14 1252 aaPredicted RBP10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 C12orf77C9JDV5 145 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 RNASEK-C17orf49H0YIS7 233 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 C15orf65H3BRN8 121 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 SSX5O60225 188 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 NAPSAO96009 420 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 APOA1P02647 267 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 FCER2P06734 321 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 IGHV1-8P0DP01 117 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 IGHV3-43DP0DP04 118 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 NFYBP25208 207 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 SRP14P37108 136 aaKnown RBP10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 TAS2R20P59543 309 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 GUCA2AQ02747 115 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 HCP5Q6MZN7 132 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 ZNF565Q8N9K5 539 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 SPATA3Q8NHX4 192 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 LEAP2Q969E1 77 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 MDFIQ99750 246 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 SUCNR1Q9BXA5 334 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 AUNIPQ9H7T9 357 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 METTL8Q9H825 291 aaKnown RBP10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 EXTL2Q9UBQ6 330 aa10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 MRPS7Q9Y2R9 242 aaKnown RBP10.85□□□□□ -0.67
PDLIM7-212ENST00000504380 JMJD1CQ15652 2540 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 CENPVL3A0A0U1RRI6 287 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 MEIS3P1A6NDR6 274 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 XRCC3O43542 346 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 CA11O75493 328 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 CLPXO76031 633 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 SCGNO76038 276 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 FSHBP01225 129 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 HBZP02008 142 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 PRTN3P24158 256 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 TMEM69Q5SWH9 247 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 HACD4Q5VWC8 232 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 ZNF880Q6PDB4 577 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 BRD3OSQ6XYD6 125 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 C1orf122Q6ZSJ8 110 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 BCL6BQ8N143 479 aaPredicted RBP10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 C22orf15Q8WYQ4 148 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 DMRTB1Q96MA1 342 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 BEX2Q9BXY8 128 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 NXF2Q9GZY0 626 aaKnown RBP10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 GAL3ST2Q9H3Q3 398 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 TAF9BQ9HBM6 251 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 Q9N2K0 584 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 MBNL3Q9NUK0 354 aaKnown RBP10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 TMEM160Q9NX00 188 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 IDI2-AS1Q9NZ38 188 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 SESN1Q9Y6P5 492 aa10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 ANK3Q12955 4377 aaKnown RBP10.84□□□□□ -0.67
PDLIM7-212ENST00000504380 HIVEP2P31629 2446 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms