RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 FAM90A13PP0C7W8 464 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 FAM90A14PP0C7W9 464 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 FAM90A24PP0C7X0 464 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 CD28P10747 220 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 CD24P25063 80 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 RBM11P57052 281 aaKnown RBP11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 CTF1Q16619 201 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 PAN3Q58A45 887 aaKnown RBP11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 TPTE2P1Q5T6R2 138 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 DDI2Q5TDH0 399 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 C11orf44Q8N8P7 122 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 FAM110DQ8TAY7 271 aaPredicted RBP11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 NDNFQ8TB73 568 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 ZNF596Q8TC21 504 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 OR5M11Q96RB7 305 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 ABCB10Q9NRK6 738 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 ING3Q9NXR8 418 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 CALYQ9NYX4 217 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 OR6C3Q9NZP0 311 aa11.18□□□□□ -0.62
PDLIM7-211ENST00000504318 C15orf65H3BRN8 121 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 F2RL2O00254 374 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 IL1AP01583 271 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 CD1AP06126 327 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 CD2P06729 351 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 CSF1P09603 554 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 VSIG10L2P0DP72 767 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 BDKRB2P30411 391 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 ZNF93P35789 620 aaPredicted RBP11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 LSAMPQ13449 338 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 DIAPH2-AS1Q14236 149 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 Q499Y3 187 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 YIF1BQ5BJH7 314 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 Q6ZTK2 550 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 SUMF2Q8NBJ7 301 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 UFD1Q92890 307 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 NAA50Q9GZZ1 169 aaKnown RBP11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 NDUFB11Q9NX14 153 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 RCC2Q9P258 522 aaKnown RBP11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 ST3GAL6Q9Y274 331 aa11.17□□□□□ -0.62
PDLIM7-211ENST00000504318 TRAV39A0A0B4J263 110 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 A0A1W2PPI3 338 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 LEUTXA8MZ59 168 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 GEMIN2O14893 280 aaKnown RBP11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 HTR3BO95264 441 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 OPN1MWP04001 364 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 OPN1MW2P0DN77 364 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 OPN1MW3P0DN78 364 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 CPEP16870 476 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 PSMA1P25786 263 aaKnown RBP11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 SSTR5P35346 364 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 GLP1RP43220 463 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 KCNJ3P48549 501 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 SERPINB10P48595 397 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 TAS2R43P59537 309 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 RSU1Q15404 277 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 TCTEX1D4Q5JR98 221 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 KPRPQ5T749 579 aaPredicted RBP11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 SAMD5Q5TGI4 173 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 C16orf82Q7Z2V1 217 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 GAPTQ8N292 157 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 OR4D6Q8NGJ1 314 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 OR9G1Q8NH87 305 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 CPNE2Q96FN4 548 aaPredicted RBP11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 RBM14Q96PK6 669 aaKnown RBP11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 DERL3Q96Q80 235 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 OR14A2Q96R54 314 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 GPER1Q99527 375 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 DCUN1D5Q9BTE7 237 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 DPCDQ9BVM2 203 aaPredicted RBP11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 PRSS22Q9GZN4 317 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 MMP28Q9H239 520 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 LIN7BQ9HAP6 207 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 IDI2-AS1Q9NZ38 188 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 PSG11Q9UQ72 335 aa11.16□□□□□ -0.62
PDLIM7-211ENST00000504318 MEIKINA0A087WXM9 373 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 J3QR06 171 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 MAGEB3O15480 346 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 OR2F2O95006 317 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 GADD45AP24522 165 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 CD83Q01151 205 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 GPR50Q13585 617 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 TPBGQ13641 420 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 BEAN1Q3B7T3 259 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 FAM53AQ6NSI3 398 aaPredicted RBP11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 C1QL4Q86Z23 238 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 LYG1Q8N1E2 194 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 OSR2Q8N2R0 312 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 MRGPRDQ8TDS7 321 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 LEAP2Q969E1 77 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 METTL9Q9H1A3 318 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 STUB1Q9UNE7 303 aa11.15□□□□□ -0.62
PDLIM7-211ENST00000504318 OOSP1A8MZH6 123 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 G3V4G9 280 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 FBXO24O75426 580 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 SERPINA2P20848 420 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 LOXL3P58215 753 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 PPP3R1P63098 170 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 MPV17LQ2QL34 196 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 SIGIRRQ6IA17 410 aa11.14□□□□□ -0.63
PDLIM7-211ENST00000504318 LINC00299Q6ZSB3 139 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms