RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 TSEN15Q8WW01 171 aaKnown RBP9.35□□□□□ -0.91
LSM6-204ENST00000504181 BTBD10Q9BSF8 475 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 CMC2Q9NRP2 79 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 CNOT2Q9NZN8 540 aaKnown RBP9.35□□□□□ -0.91
LSM6-204ENST00000504181 APLNQ9ULZ1 77 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 TP53TG1Q9Y2A0 90 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 BBIP1A8MTZ0 92 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 LOC110117498-PIK3R3F6TDL0 507 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 NBR2O15453 112 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 TXNL1O43396 289 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 IFNA4P05014 189 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 VHLP40337 213 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 RIDAP52758 137 aaKnown RBP9.34□□□□□ -0.91
LSM6-204ENST00000504181 CRIP2P52943 208 aaPredicted RBP9.34□□□□□ -0.91
LSM6-204ENST00000504181 TCTAP57738 103 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 LSAMPQ13449 338 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 RBMS2Q15434 407 aaKnown RBP9.34□□□□□ -0.91
LSM6-204ENST00000504181 C5orf64Q2M2E5 130 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 ACTBL2Q562R1 376 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 DEGS2Q6QHC5 323 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 HDXQ7Z353 690 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 TMEM179BQ7Z7N9 219 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 LINC00311Q8N616 119 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 OR51T1Q8NGJ9 327 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 ZNF251Q9BRH9 671 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 BARHL1Q9BZE3 327 aa9.34□□□□□ -0.91
LSM6-204ENST00000504181 LRP1BQ9NZR2 4599 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 IGHV3-43A0A0B4J1X8 118 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 C13orf42A0A1B0GVH6 325 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 DHRS7CA6NNS2 312 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 IGLL5B9A064 214 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 DEGS1O15121 323 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 SLC31A2O15432 143 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 MITFO75030 526 aaPredicted RBP9.33□□□□□ -0.92
LSM6-204ENST00000504181 SRSF10O75494 262 aaKnown RBP9.33□□□□□ -0.92
LSM6-204ENST00000504181 GATBO75879 557 aaKnown RBP9.33□□□□□ -0.92
LSM6-204ENST00000504181 IGHV3-43DP0DP04 118 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 ATP1B3P54709 279 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 MAGOHP61326 146 aaKnown RBP9.33□□□□□ -0.92
LSM6-204ENST00000504181 TATDN3Q17R31 274 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 ODF4Q2M2E3 257 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 LCE2AQ5TA79 106 aaPredicted RBP9.33□□□□□ -0.92
LSM6-204ENST00000504181 UNQ5815/PRO19632Q6UWF5 114 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 ELMOD2Q8IZ81 293 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 CHST4Q8NCG5 386 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 DNAAF1Q8NEP3 725 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 UBALD1Q8TB05 177 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 DYNLRB2Q8TF09 96 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 RFT1Q96AA3 541 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 WDR89Q96FK6 387 aaPredicted RBP9.33□□□□□ -0.92
LSM6-204ENST00000504181 FAM103A1Q9BTL3 118 aaKnown RBP9.33□□□□□ -0.92
LSM6-204ENST00000504181 SLA2Q9H6Q3 261 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 IKZF2Q9UKS7 526 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 NUBP2Q9Y5Y2 271 aa9.33□□□□□ -0.92
LSM6-204ENST00000504181 IGKV1-12A0A0C4DH73 117 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 SDCBPO00560 298 aaPredicted RBP9.32□□□□□ -0.92
LSM6-204ENST00000504181 NME4O00746 187 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 E2F6O75461 281 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 GASTP01350 101 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 IGKV1D-12P01611 117 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 CSTBP04080 98 aaKnown RBP9.32□□□□□ -0.92
LSM6-204ENST00000504181 EGR2P11161 476 aaPredicted RBP9.32□□□□□ -0.92
LSM6-204ENST00000504181 CD40LGP29965 261 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 RBP2P50120 134 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 ALDH3A2P51648 485 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 TMEM267Q0VDI3 215 aaPredicted RBP9.32□□□□□ -0.92
LSM6-204ENST00000504181 TMEM177Q53S58 311 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 PLEKHG7Q6ZR37 379 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 Q6ZSR3 168 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 PPP1R27Q86WC6 154 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 ZNF679Q8IYX0 411 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 IQCF1Q8N6M8 205 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 PLPPR1Q8TBJ4 325 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 CHST5Q9GZS9 411 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 MOB1AQ9H8S9 216 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 ZNF355PQ9NSJ1 428 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 MBNL3Q9NUK0 354 aaKnown RBP9.32□□□□□ -0.92
LSM6-204ENST00000504181 OR52A1Q9UKL2 312 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 AP3M1Q9Y2T2 418 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 SELENOKQ9Y6D0 94 aa9.32□□□□□ -0.92
LSM6-204ENST00000504181 SRRM2Q9UQ35 2752 aaKnown RBP9.32□□□□□ -0.92
LSM6-204ENST00000504181 C16orf90A8MZG2 172 aa9.31□□□□□ -0.92
LSM6-204ENST00000504181 H0YJX3 145 aa9.31□□□□□ -0.92
LSM6-204ENST00000504181 ZNF254O75437 659 aa9.31□□□□□ -0.92
LSM6-204ENST00000504181 TRBV12-3P01733 135 aa9.31□□□□□ -0.92
LSM6-204ENST00000504181 MRPL3P09001 348 aaKnown RBP9.31□□□□□ -0.92
LSM6-204ENST00000504181 CTRB1P17538 263 aa9.31□□□□□ -0.92
LSM6-204ENST00000504181 RPS7P62081 194 aaKnown RBP9.31□□□□□ -0.92
LSM6-204ENST00000504181 CX3CL1P78423 397 aa9.31□□□□□ -0.92
LSM6-204ENST00000504181 DEFA5Q01523 94 aa9.31□□□□□ -0.92
LSM6-204ENST00000504181 RPEL1Q2QD12 228 aa9.31□□□□□ -0.92
LSM6-204ENST00000504181 PAN3Q58A45 887 aaKnown RBP9.31□□□□□ -0.92
LSM6-204ENST00000504181 RSBN1Q5VWQ0 802 aaPredicted RBP9.31□□□□□ -0.92
LSM6-204ENST00000504181 ZNF660Q6AZW8 331 aaPredicted RBP9.31□□□□□ -0.92
LSM6-204ENST00000504181 CTRB2Q6GPI1 263 aa9.31□□□□□ -0.92
LSM6-204ENST00000504181 CD200R1LQ6Q8B3 271 aa9.31□□□□□ -0.92
LSM6-204ENST00000504181 SLC25A48Q6ZT89 311 aaKnown RBP9.31□□□□□ -0.92
LSM6-204ENST00000504181 Q6ZWC4 215 aa9.31□□□□□ -0.92
LSM6-204ENST00000504181 SLC16A13Q7RTY0 426 aa9.31□□□□□ -0.92
LSM6-204ENST00000504181 LFNGQ8NES3 379 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms