RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 M0R1W7 72 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 MFNGO00587 321 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 RGS5O15539 181 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 HPGDSO60760 199 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 TOX4O94842 621 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 APOA1P02647 267 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 MT-ND4P03905 459 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 CD3GP09693 182 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 HNF1AP20823 631 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 ARL6IP1Q15041 203 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 FOXB2Q5VYV0 432 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 ZNF565Q8N9K5 539 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 OR13A1Q8NGR1 328 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 OR4K15Q8NH41 348 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 SETD6Q8TBK2 473 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 MRPL30Q8TCC3 161 aaKnown RBP8.23□□□□□ -1.09
NUP54-203ENST00000504173 MRGPRDQ8TDS7 321 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 CCDC107Q8WV48 283 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 CORO2AQ92828 525 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 S100A16Q96FQ6 103 aaKnown RBP8.23□□□□□ -1.09
NUP54-203ENST00000504173 CMTM3Q96MX0 182 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 WDFY2Q96P53 400 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 CMSS1Q9BQ75 279 aaKnown RBP8.23□□□□□ -1.09
NUP54-203ENST00000504173 SIRPDQ9H106 197 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 ABCG5Q9H222 651 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 GAL3ST2Q9H3Q3 398 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 ZMAT3Q9HA38 289 aaKnown RBP8.23□□□□□ -1.09
NUP54-203ENST00000504173 SIRT7Q9NRC8 400 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 TAS2R3Q9NYW6 316 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 AK3Q9UIJ7 227 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 TRAPPC2LQ9UL33 140 aa8.23□□□□□ -1.09
NUP54-203ENST00000504173 DSCAML1Q8TD84 2053 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 TRAV18A0A075B6X5 111 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 ZNF729A6NN14 1252 aaPredicted RBP8.22□□□□□ -1.09
NUP54-203ENST00000504173 SERPINE3A8MV23 424 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 C17orf98A8MV24 154 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 CLPXO76031 633 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 AVPP01185 164 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 EIF4EP06730 217 aaKnown RBP8.22□□□□□ -1.09
NUP54-203ENST00000504173 GSTP1P09211 210 aaKnown RBP8.22□□□□□ -1.09
NUP54-203ENST00000504173 MMP9P14780 707 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 CDK2P24941 298 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 DLX6P56179 175 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 ERVFRD-1P60508 538 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 ARFRP1Q13795 201 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 CDNFQ49AH0 187 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 MIDNQ504T8 468 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 TMEM69Q5SWH9 247 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 FAM120AOSQ5T036 256 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 C6orf183Q5T699 404 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 OLFML2AQ68BL7 652 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 VMO1Q7Z5L0 202 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 IZUMO1Q8IYV9 350 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 GAPTQ8N292 157 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 TEX29Q8N6K0 151 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 Q8N7P7 452 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.22□□□□□ -1.09
NUP54-203ENST00000504173 DTX3Q8N9I9 347 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 MCFD2Q8NI22 146 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 TBX15Q96SF7 602 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 HDHD3Q9BSH5 251 aaPredicted RBP8.22□□□□□ -1.09
NUP54-203ENST00000504173 SLIRPQ9GZT3 109 aaKnown RBP8.22□□□□□ -1.09
NUP54-203ENST00000504173 C6orf62Q9GZU0 229 aaPredicted RBP8.22□□□□□ -1.09
NUP54-203ENST00000504173 RIMS4Q9H426 269 aaPredicted RBP8.22□□□□□ -1.09
NUP54-203ENST00000504173 METTL8Q9H825 291 aaKnown RBP8.22□□□□□ -1.09
NUP54-203ENST00000504173 C12orf4Q9NQ89 552 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 CALYQ9NYX4 217 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 OPN4Q9UHM6 478 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 ADAM30Q9UKF2 790 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 KCNK7Q9Y2U2 307 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 BOLA1Q9Y3E2 137 aa8.22□□□□□ -1.09
NUP54-203ENST00000504173 KIAA2026Q5HYC2 2103 aa8.21□□□□□ -1.09
NUP54-203ENST00000504173 TRAV40A0A0B4J280 105 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 KBTBD11-OT1A0A1B0GTJ5 212 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 TMEM235A6NFC5 223 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 A6NHS1 94 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 XRCC3O43542 346 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 NAPSAO96009 420 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 RBP4P02753 201 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 ELK1P19419 428 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 GZMHP20718 246 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 PRTN3P24158 256 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 SSTR5P35346 364 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 SRP14P37108 136 aaKnown RBP8.21□□□□□ -1.1
NUP54-203ENST00000504173 TALDO1P37837 337 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 MNDAP41218 407 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 DLX1P56177 255 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 GNG2P59768 71 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 C17orf58Q2M2W7 97 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 ZNF260Q3ZCT1 412 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 PRAMEF5Q5TYX0 476 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 NCR3LG1Q68D85 454 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 TRAT1Q6PIZ9 186 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 ZNF782Q6ZMW2 699 aaPredicted RBP8.21□□□□□ -1.1
NUP54-203ENST00000504173 C1orf229Q6ZS94 237 aaPredicted RBP8.21□□□□□ -1.1
NUP54-203ENST00000504173 C1orf122Q6ZSJ8 110 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 IL17RELQ6ZVW7 336 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 MOB1BQ7L9L4 216 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 LAX1Q8IWV1 398 aa8.21□□□□□ -1.1
NUP54-203ENST00000504173 NANPQ8TBE9 248 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms