RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 GDF9O60383 454 aa12.81□□□□□ -0.36
SNF8-203ENST00000504000 IFNA5P01569 189 aa12.81□□□□□ -0.36
SNF8-203ENST00000504000 HOXA6P31267 233 aa12.81□□□□□ -0.36
SNF8-203ENST00000504000 CD81P60033 236 aa12.81□□□□□ -0.36
SNF8-203ENST00000504000 HLA-DRB3P79483 266 aa12.81□□□□□ -0.36
SNF8-203ENST00000504000 Q8WTZ3 238 aa12.81□□□□□ -0.36
SNF8-203ENST00000504000 MBD3L1Q8WWY6 194 aa12.81□□□□□ -0.36
SNF8-203ENST00000504000 EDARADDQ8WWZ3 215 aa12.81□□□□□ -0.36
SNF8-203ENST00000504000 APOBEC3DQ96AK3 386 aaPredicted RBP12.81□□□□□ -0.36
SNF8-203ENST00000504000 CABLES2Q9BTV7 478 aa12.81□□□□□ -0.36
SNF8-203ENST00000504000 CISD1Q9NZ45 108 aaKnown RBP12.81□□□□□ -0.36
SNF8-203ENST00000504000 MTCH1Q9NZJ7 389 aa12.81□□□□□ -0.36
SNF8-203ENST00000504000 DOK5Q9P104 306 aa12.81□□□□□ -0.36
SNF8-203ENST00000504000 OR2W1Q9Y3N9 320 aa12.81□□□□□ -0.36
SNF8-203ENST00000504000 EYSQ5T1H1 3165 aa12.81□□□□□ -0.36
SNF8-203ENST00000504000 TNRC6AQ8NDV7 1962 aaKnown RBP12.81□□□□□ -0.36
SNF8-203ENST00000504000 TRAV20A0A0B4J274 112 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 A0A0G2JMM0 328 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 A0A1W2PPB8 328 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 A0A1W2PRS3 328 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 KIR3DP1A8MWS1 328 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 SEC14L6B5MCN3 397 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 H0YL77 283 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 RFPL3SP0C7P2 107 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 ITGA3P26006 1051 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 RND2P52198 227 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 FAM209BQ5JX69 171 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 ACER2Q5QJU3 275 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 NCMAPQ5T1S8 102 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 ZNF324BQ6AW86 544 aaPredicted RBP12.8□□□□□ -0.36
SNF8-203ENST00000504000 P2RX4Q99571 388 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 PARD6GQ9BYG4 376 aaPredicted RBP12.8□□□□□ -0.36
SNF8-203ENST00000504000 FGF23Q9GZV9 251 aaPredicted RBP12.8□□□□□ -0.36
SNF8-203ENST00000504000 GAR1Q9NY12 217 aaKnown RBP12.8□□□□□ -0.36
SNF8-203ENST00000504000 RFNGQ9Y644 331 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 ELOA3CA0A087WX78 387 aaPredicted RBP12.8□□□□□ -0.36
SNF8-203ENST00000504000 ZNF729A6NN14 1252 aaPredicted RBP12.8□□□□□ -0.36
SNF8-203ENST00000504000 MRPL33O75394 65 aaKnown RBP12.8□□□□□ -0.36
SNF8-203ENST00000504000 DUSP3P51452 185 aaPredicted RBP12.8□□□□□ -0.36
SNF8-203ENST00000504000 SERF2P84101 59 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 ZNF154Q13106 437 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 PMS2CLQ68D20 193 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 TMEM217Q8N7C4 229 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 MRPL30Q8TCC3 161 aaKnown RBP12.8□□□□□ -0.36
SNF8-203ENST00000504000 IER2Q9BTL4 223 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 TREM2Q9NZC2 230 aa12.8□□□□□ -0.36
SNF8-203ENST00000504000 ZNF727A8MUV8 499 aa12.79□□□□□ -0.36
SNF8-203ENST00000504000 CCL4P13236 92 aa12.79□□□□□ -0.36
SNF8-203ENST00000504000 S100A2P29034 98 aa12.79□□□□□ -0.36
SNF8-203ENST00000504000 GPM6AP51674 278 aa12.79□□□□□ -0.36
SNF8-203ENST00000504000 ERVFRD-1P60508 538 aa12.79□□□□□ -0.36
SNF8-203ENST00000504000 RUNX1Q01196 453 aa12.79□□□□□ -0.36
SNF8-203ENST00000504000 WIPI1Q5MNZ9 446 aaPredicted RBP12.79□□□□□ -0.36
SNF8-203ENST00000504000 MRPL21Q7Z2W9 205 aaKnown RBP12.79□□□□□ -0.36
SNF8-203ENST00000504000 ABHD3Q8WU67 409 aa12.79□□□□□ -0.36
SNF8-203ENST00000504000 NOSIPQ9Y314 301 aaKnown RBP12.79□□□□□ -0.36
SNF8-203ENST00000504000 IFITM10A6NMD0 228 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 DEGS1O15121 323 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 NDUFS6O75380 124 aaKnown RBP12.78□□□□□ -0.36
SNF8-203ENST00000504000 CNOT4O95628 575 aaKnown RBP12.78□□□□□ -0.36
SNF8-203ENST00000504000 CXCL1P09341 107 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 CD200P41217 278 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 RPS18P62269 152 aaKnown RBP12.78□□□□□ -0.36
SNF8-203ENST00000504000 PPP1R32Q7Z5V6 425 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 ZNF295-AS1Q8N0V1 137 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 LINC00469Q8N7U9 141 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 GPR146Q96CH1 333 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 HIST1H2AAQ96QV6 131 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 CALHM2Q9HA72 323 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 MMP24Q9Y5R2 645 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 OR5B21A6NL26 309 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.78□□□□□ -0.36
SNF8-203ENST00000504000 HIST1H2BKO60814 126 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 YIF1AO95070 293 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 HIST1H2BJP06899 126 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 SERPINE2P07093 398 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 HIST1H2BOP23527 126 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 HIST1H2BBP33778 126 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 HIST1H2BDP58876 126 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 HIST1H2BCP62807 126 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 ARF1P84077 181 aaKnown RBP12.78□□□□□ -0.36
SNF8-203ENST00000504000 HIST2H2BEQ16778 126 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 ZNF674Q2M3X9 581 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.78□□□□□ -0.36
SNF8-203ENST00000504000 FAM90A2PQ658T7 463 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 OR10J5Q8NHC4 309 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 HIST1H2BHQ93079 126 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 HS3ST6Q96QI5 342 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 HIST1H2BNQ99877 126 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 HIST1H2BMQ99879 126 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 MPC1Q9Y5U8 109 aa12.78□□□□□ -0.36
SNF8-203ENST00000504000 MYO15AQ9UKN7 3530 aa12.77□□□□□ -0.36
SNF8-203ENST00000504000 SPEGQ15772 3267 aa12.77□□□□□ -0.37
SNF8-203ENST00000504000 B4E171 279 aa12.77□□□□□ -0.37
SNF8-203ENST00000504000 TRAPPC6AO75865 159 aa12.77□□□□□ -0.37
SNF8-203ENST00000504000 BCL2P10415 239 aa12.77□□□□□ -0.37
SNF8-203ENST00000504000 ARR3P36575 388 aa12.77□□□□□ -0.37
SNF8-203ENST00000504000 TSPAN7P41732 249 aa12.77□□□□□ -0.37
SNF8-203ENST00000504000 CYB561P49447 251 aa12.77□□□□□ -0.37
SNF8-203ENST00000504000 Q0VFX4 171 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms