RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 RORCP51449 518 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 ARL6IP1Q15041 203 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 MOGAT2Q3SYC2 334 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 PLAC9Q5JTB6 97 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 PRAMEF5Q5TYX0 476 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 HCP5Q6MZN7 132 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 PNKDQ8N490 385 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 OR10A7Q8NGE5 316 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 OR5H6Q8NGV6 325 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 OR4K15Q8NH41 348 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 NDNFQ8TB73 568 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 MRPL30Q8TCC3 161 aaKnown RBP9.09□□□□□ -0.95
VCAN-205ENST00000503923 ZNF418Q8TF45 676 aaPredicted RBP9.09□□□□□ -0.95
VCAN-205ENST00000503923 C22orf15Q8WYQ4 148 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 KCTD12Q96CX2 325 aaKnown RBP9.09□□□□□ -0.95
VCAN-205ENST00000503923 SLC6A7Q99884 636 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 SUCNR1Q9BXA5 334 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 TMEM133Q9H2Q1 129 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 OCEL1Q9H607 264 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 LINC00574Q9H8X3 128 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 CHMP1AQ9HD42 196 aaPredicted RBP9.09□□□□□ -0.95
VCAN-205ENST00000503923 RAB9BQ9NP90 201 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 RHBDL2Q9NX52 303 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 IDI2-AS1Q9NZ38 188 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 AK3Q9UIJ7 227 aa9.09□□□□□ -0.95
VCAN-205ENST00000503923 IGHV2-26A0A0B4J1V2 119 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 A0A1W2PRD5 423 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 A0A1W2PRF3 423 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 A0A1W2PRM7 423 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 POM121CA8CG34 1229 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 MMP23AO75900 390 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 HIST1H1DP16402 221 aaKnown RBP9.08□□□□□ -0.96
VCAN-205ENST00000503923 OMGP23515 440 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 SSTR5P35346 364 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 DYNC1I2Q13409 638 aaKnown RBP9.08□□□□□ -0.96
VCAN-205ENST00000503923 MIDNQ504T8 468 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 RBMS3Q6XE24 437 aaKnown RBP9.08□□□□□ -0.96
VCAN-205ENST00000503923 ZNF554Q86TJ5 538 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 RTN4RL2Q86UN3 420 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 BCL6BQ8N143 479 aaPredicted RBP9.08□□□□□ -0.96
VCAN-205ENST00000503923 PIP4P2Q8N4L2 257 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 OR11H6Q8NGC7 330 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 ARL11Q969Q4 196 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 PHF21AQ96BD5 680 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 KIRREL1Q96J84 757 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 CYYR1Q96J86 154 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 CMSS1Q9BQ75 279 aaKnown RBP9.08□□□□□ -0.96
VCAN-205ENST00000503923 CLEC7AQ9BXN2 247 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 MBNL3Q9NUK0 354 aaKnown RBP9.08□□□□□ -0.96
VCAN-205ENST00000503923 KCNIP1Q9NZI2 227 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 C2CD3Q4AC94 2353 aa9.08□□□□□ -0.96
VCAN-205ENST00000503923 JMJD1CQ15652 2540 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 A0A075B6Q4 140 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 A0A087X0M5 115 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 TRBV6-6A0A0A6YYG2 114 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 A0A0A6YYH2 397 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 A0A0A6YYJ9 748 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 A0A1B0GX30 115 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 MEIOCA2RUB1 952 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 A6NJ64 397 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 SERPINE3A8MV23 424 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 C12orf77C9JDV5 145 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 C15orf65H3BRN8 121 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 MFNGO00587 321 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 SPINT2O43291 252 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 TCF21O43680 179 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 NAPSAO96009 420 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 ARG1P05089 322 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 CD3GP09693 182 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 GNB3P16520 340 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 RCC1P18754 421 aaPredicted RBP9.07□□□□□ -0.96
VCAN-205ENST00000503923 NFYBP25208 207 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 CD34P28906 385 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 GDNFP39905 211 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 LGALS4P56470 323 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 MRPS15P82914 257 aaKnown RBP9.07□□□□□ -0.96
VCAN-205ENST00000503923 TUSC1Q2TAM9 212 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 TMEM30BQ3MIR4 351 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 UBE2NLQ5JXB2 153 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 MOB1BQ7L9L4 216 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 ABHD12Q8N2K0 398 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 SIGLECL1Q8N7X8 197 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 OR52M1Q8NGK5 317 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 RFESDQ8TAC1 157 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 ACOT12Q8WYK0 555 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 AP3S1Q92572 193 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 ISOC1Q96CN7 298 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 SLC25A38Q96DW6 304 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 JMJD8Q96S16 334 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 ABCG5Q9H222 651 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 C12orf4Q9NQ89 552 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.07□□□□□ -0.96
VCAN-205ENST00000503923 MGAT4AQ9UM21 535 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 KCNK7Q9Y2U2 307 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 FAM96BQ9Y3D0 163 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 SOX21Q9Y651 276 aaPredicted RBP9.07□□□□□ -0.96
VCAN-205ENST00000503923 CEPT1Q9Y6K0 416 aa9.07□□□□□ -0.96
VCAN-205ENST00000503923 A0A0U1RQK1 487 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 ODF3BA8MYP8 253 aa9.06□□□□□ -0.96
VCAN-205ENST00000503923 F2RL2O00254 374 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms