RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 SPATS1Q496A3 300 aa12.11□□□□□ -0.47
PDLIM7-210ENST00000503827 FAM98BQ52LJ0 330 aaKnown RBP12.11□□□□□ -0.47
PDLIM7-210ENST00000503827 RSBN1Q5VWQ0 802 aaPredicted RBP12.11□□□□□ -0.47
PDLIM7-210ENST00000503827 C8orf31Q8N9H6 132 aa12.11□□□□□ -0.47
PDLIM7-210ENST00000503827 MINDY2Q8NBR6 621 aa12.11□□□□□ -0.47
PDLIM7-210ENST00000503827 ADGRL4Q9HBW9 690 aa12.11□□□□□ -0.47
PDLIM7-210ENST00000503827 ERGIC3Q9Y282 383 aa12.11□□□□□ -0.47
PDLIM7-210ENST00000503827 CEPT1Q9Y6K0 416 aa12.11□□□□□ -0.47
PDLIM7-210ENST00000503827 TRAV39A0A0B4J263 110 aa12.1□□□□□ -0.47
PDLIM7-210ENST00000503827 A0A1W2PN81 502 aa12.1□□□□□ -0.47
PDLIM7-210ENST00000503827 TCRBV5S2A0A599 114 aa12.1□□□□□ -0.47
PDLIM7-210ENST00000503827 UBCP0CG48 685 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-210ENST00000503827 GZMHP20718 246 aa12.1□□□□□ -0.47
PDLIM7-210ENST00000503827 CHRNA7P36544 502 aa12.1□□□□□ -0.47
PDLIM7-210ENST00000503827 RDH10Q8IZV5 341 aa12.1□□□□□ -0.47
PDLIM7-210ENST00000503827 OR52M1Q8NGK5 317 aa12.1□□□□□ -0.47
PDLIM7-210ENST00000503827 GATAD1Q8WUU5 269 aa12.1□□□□□ -0.47
PDLIM7-210ENST00000503827 FGGYQ96C11 551 aa12.1□□□□□ -0.47
PDLIM7-210ENST00000503827 SPACA5Q96QH8 159 aa12.1□□□□□ -0.47
PDLIM7-210ENST00000503827 NR1H4Q96RI1 486 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-210ENST00000503827 ST6GALNAC5Q9BVH7 336 aa12.1□□□□□ -0.47
PDLIM7-210ENST00000503827 H2AFY2Q9P0M6 372 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-210ENST00000503827 IGHV7-81A0A0B4J1V7 117 aa12.09□□□□□ -0.47
PDLIM7-210ENST00000503827 TRAV24A0A0B4J272 114 aa12.09□□□□□ -0.47
PDLIM7-210ENST00000503827 SDCBPO00560 298 aaPredicted RBP12.09□□□□□ -0.47
PDLIM7-210ENST00000503827 CST1P01037 141 aa12.09□□□□□ -0.47
PDLIM7-210ENST00000503827 HLA-DRB1P01911 266 aa12.09□□□□□ -0.47
PDLIM7-210ENST00000503827 DBTP11182 482 aaKnown RBP12.09□□□□□ -0.47
PDLIM7-210ENST00000503827 BLVRBP30043 206 aaPredicted RBP12.09□□□□□ -0.47
PDLIM7-210ENST00000503827 KCNJ3P48549 501 aa12.09□□□□□ -0.47
PDLIM7-210ENST00000503827 PAX5Q02548 391 aa12.09□□□□□ -0.47
PDLIM7-210ENST00000503827 SSX6Q7RTT6 188 aa12.09□□□□□ -0.47
PDLIM7-210ENST00000503827 CNIH3Q8TBE1 160 aa12.09□□□□□ -0.47
PDLIM7-210ENST00000503827 PLPPR1Q8TBJ4 325 aa12.09□□□□□ -0.47
PDLIM7-210ENST00000503827 LRGUKQ96M69 825 aa12.09□□□□□ -0.47
PDLIM7-210ENST00000503827 TBX5Q99593 518 aa12.09□□□□□ -0.47
PDLIM7-210ENST00000503827 METTL15A6NJ78 407 aa12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 RGS11O94810 467 aa12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 IGHV3-11P01762 117 aa12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 TMEM225BP0DP42 221 aa12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 FSTP19883 344 aa12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 MNAT1P51948 309 aa12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 RAB40BQ12829 278 aa12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 ECSCRQ19T08 205 aa12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 TMEM244Q5VVB8 128 aa12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 FAHD1Q6P587 224 aa12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 PRSS35Q8N3Z0 413 aa12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 CASTOR1Q8WTX7 329 aa12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 ARL11Q969Q4 196 aa12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 CST11Q9H112 138 aa12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 GFOD1Q9NXC2 390 aa12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 FOXA2Q9Y261 457 aaPredicted RBP12.08□□□□□ -0.48
PDLIM7-210ENST00000503827 SHISA3A0PJX4 238 aa12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 GNGT2O14610 69 aa12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 PRKYO43930 277 aa12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 SOX15O60248 233 aa12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 SULT1C4O75897 302 aa12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 MT-ND2P03891 347 aa12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 CSTBP04080 98 aaKnown RBP12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 LIN54Q6MZP7 749 aa12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 LINC00322Q6ZN03 302 aaPredicted RBP12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 SLC25A48Q6ZT89 311 aaKnown RBP12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 BCDIN3DQ7Z5W3 292 aaKnown RBP12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 TMEM179BQ7Z7N9 219 aa12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 DEFB107AQ8IZN7 70 aa12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 RPP25LQ8N5L8 163 aaKnown RBP12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 TCTEX1D1Q8N7M0 179 aa12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 UTP4Q969X6 686 aaKnown RBP12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 ZNF251Q9BRH9 671 aa12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 ANKRD60Q9BZ19 345 aa12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 MYRFQ9Y2G1 1151 aa12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 RYR1P21817 5038 aa12.07□□□□□ -0.48
PDLIM7-210ENST00000503827 IGHV3-43A0A0B4J1X8 118 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 BRI3O95415 125 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 IGHV3-43DP0DP04 118 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 RAP2AP10114 183 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 ANXA8P13928 327 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 VHLP40337 213 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 ZNF137PP52743 207 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 ACTBP60709 375 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 LSAMPQ13449 338 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 Q3ZCU0 254 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 NXNL2Q5VZ03 156 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 LCN12Q6JVE5 192 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 PYHIN1Q6K0P9 492 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 OR13C9Q8NGT0 318 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 NABP2Q9BQ15 211 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 THAP7Q9BT49 309 aaPredicted RBP12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 PRRG3Q9BZD7 231 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 NDE1Q9NXR1 346 aa12.06□□□□□ -0.48
PDLIM7-210ENST00000503827 CXorf65A6NEN9 183 aa12.05□□□□□ -0.48
PDLIM7-210ENST00000503827 C15orf65H3BRN8 121 aa12.05□□□□□ -0.48
PDLIM7-210ENST00000503827 SLC31A2O15432 143 aa12.05□□□□□ -0.48
PDLIM7-210ENST00000503827 NBR2O15453 112 aa12.05□□□□□ -0.48
PDLIM7-210ENST00000503827 OR2T7P0C7T2 308 aa12.05□□□□□ -0.48
PDLIM7-210ENST00000503827 ZP3P21754 424 aa12.05□□□□□ -0.48
PDLIM7-210ENST00000503827 CRISP1P54107 249 aa12.05□□□□□ -0.48
PDLIM7-210ENST00000503827 IL13RA2Q14627 380 aa12.05□□□□□ -0.48
PDLIM7-210ENST00000503827 C5orf64Q2M2E5 130 aa12.05□□□□□ -0.48
PDLIM7-210ENST00000503827 C19orf54Q5BKX5 351 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms