RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 FAM118AQ9NWS6 357 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 IMPAD1Q9NX62 359 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 SCOCQ9UIL1 159 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 OAZ3Q9UMX2 235 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 DHDHQ9UQ10 334 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 NBEAL2Q6ZNJ1 2754 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 TMEM30CPA0ZSE6 113 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 FAM172BPA6NC97 362 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 FAM90A10PA6NDY2 464 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 FAM90A7PA6NKC0 464 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 NUDT19A8MXV4 375 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 FAM90A23PA8MXZ1 464 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 GABRPO00591 440 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 ARPC1BO15143 372 aaKnown RBP4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 SC5DO75845 299 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 MOSP00540 346 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 CD2P06729 351 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 TMEM225BP0DP42 221 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 VSIG8P0DPA2 414 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 PPIFP30405 207 aaKnown RBP4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 SOX6P35712 828 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 VHLP40337 213 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 GLP1RP43220 463 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 ALDH3A2P51648 485 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 SNU13P55769 128 aaKnown RBP4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 DIAPH2-AS1Q14236 149 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 GPR176Q14439 515 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 HES1Q14469 280 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 RBM39Q14498 530 aaKnown RBP4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 NKAPLQ5M9Q1 402 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 UTF1Q5T230 341 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 RPL22L1Q6P5R6 122 aaKnown RBP4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 SLC25A48Q6ZT89 311 aaKnown RBP4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 ZNF429Q86V71 674 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 SUMF2Q8NBJ7 301 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 ZNF439Q8NDP4 499 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 OR51A2Q8NGJ7 313 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 OR5D18Q8NGL1 313 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 PLPPR1Q8TBJ4 325 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 MRGPRDQ8TDS7 321 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 RTN4IP1Q8WWV3 396 aaPredicted RBP4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 LGALS12Q96DT0 336 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 NOL4LQ96MY1 436 aaPredicted RBP4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 SPACA5Q96QH8 159 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 S1PR3Q99500 378 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 ALG8Q9BVK2 526 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 DPCDQ9BVM2 203 aaPredicted RBP4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 ERVK13-1Q9NX77 482 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 GFOD1Q9NXC2 390 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 RCC2Q9P258 522 aaKnown RBP4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 ST3GAL6Q9Y274 331 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 ZNF256Q9Y2P7 627 aaPredicted RBP4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 ORC6Q9Y5N6 252 aa4.78□□□□□ -1.64
LSM3P4-201ENST00000502948 SORL1Q92673 2214 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 SH2D7A6NKC9 451 aaPredicted RBP4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 A8MZ25 164 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 H3BSH0 61 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 I3L521 148 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 J3QLW9 94 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 LANCL1O43813 399 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 IGLV1-40P01703 118 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 HLA-DRB1P01911 266 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 MT-ND4P03905 459 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 RPLP1P05386 114 aaKnown RBP4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 OR8U8P0C7N1 319 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 CALCBP10092 127 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF19P17023 458 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 VDAC1P21796 283 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 SSTR5P35346 364 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF93P35789 620 aaPredicted RBP4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 CRIP2P52943 208 aaPredicted RBP4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 GBX2P52951 348 aaPredicted RBP4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 RBM11P57052 281 aaKnown RBP4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 SCN1BQ07699 218 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 KIAA0141Q14154 515 aaPredicted RBP4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 RSU1Q15404 277 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 C6orf183Q5T699 404 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 C1orf146Q5VVC0 180 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 LPCAT4Q643R3 524 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 FAM71F2Q6NXP2 309 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF497Q6ZNH5 498 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 C18orf65Q6ZTR6 163 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 AMIGO2Q86SJ2 522 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 C10orf67Q8IYJ2 551 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 OR52N1Q8NH53 320 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 RHOXF1Q8NHV9 184 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 GPR148Q8TDV2 347 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 TNFAIP8L1Q8WVP5 186 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 RFT1Q96AA3 541 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 RASL11BQ9BPW5 248 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 METTL9Q9H1A3 318 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 OR51J1Q9H342 316 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 GHITMQ9H3K2 345 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 TMEM138Q9NPI0 162 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 MBNL3Q9NUK0 354 aaKnown RBP4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 FAM53CQ9NYF3 392 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 LRRC42Q9Y546 428 aa4.77□□□□□ -1.65
LSM3P4-201ENST00000502948 HUWE1Q7Z6Z7 4374 aaKnown RBP4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 IRGMA1A4Y4 181 aa4.76□□□□□ -1.65
LSM3P4-201ENST00000502948 LINC01548A6NM66 108 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms