RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 F2RP25116 425 aa14.1□□□□□ -0.15
VCAN-204ENST00000502527 SOX8P57073 446 aa14.1□□□□□ -0.15
VCAN-204ENST00000502527 ID3Q02535 119 aa14.1□□□□□ -0.15
VCAN-204ENST00000502527 TGFBR3Q03167 851 aa14.1□□□□□ -0.15
VCAN-204ENST00000502527 GUK1Q16774 197 aa14.1□□□□□ -0.15
VCAN-204ENST00000502527 MOB1BQ7L9L4 216 aa14.1□□□□□ -0.15
VCAN-204ENST00000502527 TMEM252Q8N6L7 170 aa14.1□□□□□ -0.15
VCAN-204ENST00000502527 MAGT1Q9H0U3 335 aa14.1□□□□□ -0.15
VCAN-204ENST00000502527 MLXQ9UH92 298 aa14.1□□□□□ -0.15
VCAN-204ENST00000502527 LRP5LA4QPB2 252 aa14.09□□□□□ -0.15
VCAN-204ENST00000502527 ZNF14P17017 642 aaPredicted RBP14.09□□□□□ -0.15
VCAN-204ENST00000502527 FHITP49789 147 aa14.09□□□□□ -0.15
VCAN-204ENST00000502527 PPT1P50897 306 aa14.09□□□□□ -0.15
VCAN-204ENST00000502527 UBE2NP61088 152 aaKnown RBP14.09□□□□□ -0.15
VCAN-204ENST00000502527 Q6P435 159 aa14.09□□□□□ -0.15
VCAN-204ENST00000502527 GLRX2Q9NS18 164 aa14.09□□□□□ -0.15
VCAN-204ENST00000502527 TREM2Q9NZC2 230 aa14.09□□□□□ -0.15
VCAN-204ENST00000502527 ERRFI1Q9UJM3 462 aaPredicted RBP14.09□□□□□ -0.15
VCAN-204ENST00000502527 POLDIP2Q9Y2S7 368 aa14.09□□□□□ -0.15
VCAN-204ENST00000502527 DNAJC13O75165 2243 aa14.09□□□□□ -0.15
VCAN-204ENST00000502527 MED13Q9UHV7 2174 aa14.09□□□□□ -0.15
VCAN-204ENST00000502527 NCOR1O75376 2440 aa14.09□□□□□ -0.15
VCAN-204ENST00000502527 NPIPB11E5RHQ5 1161 aa14.08□□□□□ -0.15
VCAN-204ENST00000502527 TNFSF12O43508 249 aa14.08□□□□□ -0.15
VCAN-204ENST00000502527 NFYBP25208 207 aa14.08□□□□□ -0.15
VCAN-204ENST00000502527 ASCL1P50553 236 aa14.08□□□□□ -0.15
VCAN-204ENST00000502527 PPP1CBP62140 327 aa14.08□□□□□ -0.15
VCAN-204ENST00000502527 BAXQ07812 192 aa14.08□□□□□ -0.15
VCAN-204ENST00000502527 CLINT1Q14677 625 aa14.08□□□□□ -0.15
VCAN-204ENST00000502527 SNIP1Q8TAD8 396 aaKnown RBP14.08□□□□□ -0.15
VCAN-204ENST00000502527 PLPPR1Q8TBJ4 325 aa14.08□□□□□ -0.15
VCAN-204ENST00000502527 CDH20Q9HBT6 801 aa14.08□□□□□ -0.15
VCAN-204ENST00000502527 PRELID3BQ9Y3B1 194 aa14.08□□□□□ -0.15
VCAN-204ENST00000502527 KNTC1P50748 2209 aa14.08□□□□□ -0.16
VCAN-204ENST00000502527 WRBO00258 174 aa14.08□□□□□ -0.16
VCAN-204ENST00000502527 HSPA12AO43301 675 aa14.08□□□□□ -0.16
VCAN-204ENST00000502527 SMPD2O60906 423 aa14.08□□□□□ -0.16
VCAN-204ENST00000502527 TNFSF10P50591 281 aa14.08□□□□□ -0.16
VCAN-204ENST00000502527 TMEM182Q6ZP80 229 aaPredicted RBP14.08□□□□□ -0.16
VCAN-204ENST00000502527 TMPRSS7Q7RTY8 843 aa14.08□□□□□ -0.16
VCAN-204ENST00000502527 VASH2Q86V25 355 aa14.08□□□□□ -0.16
VCAN-204ENST00000502527 LFNGQ8NES3 379 aa14.08□□□□□ -0.16
VCAN-204ENST00000502527 OR10V1Q8NGI7 309 aa14.08□□□□□ -0.16
VCAN-204ENST00000502527 PBDC1Q9BVG4 233 aa14.08□□□□□ -0.16
VCAN-204ENST00000502527 EIF5A2Q9GZV4 153 aaKnown RBP14.08□□□□□ -0.16
VCAN-204ENST00000502527 UMAD1C9J7I0 102 aa14.07□□□□□ -0.16
VCAN-204ENST00000502527 PROB1E7EW31 1015 aa14.07□□□□□ -0.16
VCAN-204ENST00000502527 K7N7A8 449 aa14.07□□□□□ -0.16
VCAN-204ENST00000502527 C1QL1O75973 258 aa14.07□□□□□ -0.16
VCAN-204ENST00000502527 SERPINE2P07093 398 aa14.07□□□□□ -0.16
VCAN-204ENST00000502527 WNT2P09544 360 aa14.07□□□□□ -0.16
VCAN-204ENST00000502527 OMGP23515 440 aa14.07□□□□□ -0.16
VCAN-204ENST00000502527 LMO1P25800 156 aa14.07□□□□□ -0.16
VCAN-204ENST00000502527 TRIP6Q15654 476 aaKnown RBP14.07□□□□□ -0.16
VCAN-204ENST00000502527 SCCPDHQ8NBX0 429 aa14.07□□□□□ -0.16
VCAN-204ENST00000502527 OR10Z1Q8NGY1 313 aa14.07□□□□□ -0.16
VCAN-204ENST00000502527 IL1F10Q8WWZ1 152 aa14.07□□□□□ -0.16
VCAN-204ENST00000502527 SCRT1Q9BWW7 348 aa14.07□□□□□ -0.16
VCAN-204ENST00000502527 OR2J1Q9GZK6 312 aa14.07□□□□□ -0.16
VCAN-204ENST00000502527 CHST1O43916 411 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 CELA3BP08861 270 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 SLC25A6P12236 298 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 CD82P27701 267 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 SHEQ5VZ18 495 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 OR2G3Q8NGZ4 309 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 FAM213BQ8TBF2 198 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 SMCO4Q9NRQ5 59 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 A0A1B0GU03 582 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 C3orf80F5H4A9 247 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 RAC2P15153 192 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 IGHV1-2P23083 117 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 ATP6V0CP27449 155 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 IDH3GP51553 393 aaPredicted RBP14.06□□□□□ -0.16
VCAN-204ENST00000502527 ERVK11-1P61568 191 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 IGFBP7Q16270 282 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 ZNF497Q6ZNH5 498 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 WDR86Q86TI4 376 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 MYPOPQ86VE0 399 aaPredicted RBP14.06□□□□□ -0.16
VCAN-204ENST00000502527 KDF1Q8NAX2 398 aaPredicted RBP14.06□□□□□ -0.16
VCAN-204ENST00000502527 OR5C1Q8NGR4 320 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 OR51H1Q8NH63 302 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 TAAR3PQ9P1P4 343 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 ARHGAP21Q5T5U3 1957 aa14.06□□□□□ -0.16
VCAN-204ENST00000502527 SIRPB1O00241 398 aa14.05□□□□□ -0.16
VCAN-204ENST00000502527 SLC33A1O00400 549 aaPredicted RBP14.05□□□□□ -0.16
VCAN-204ENST00000502527 TMEM50AO95807 157 aa14.05□□□□□ -0.16
VCAN-204ENST00000502527 OR2H2O95918 312 aa14.05□□□□□ -0.16
VCAN-204ENST00000502527 PMP22Q01453 160 aa14.05□□□□□ -0.16
VCAN-204ENST00000502527 TMEM171Q8WVE6 324 aa14.05□□□□□ -0.16
VCAN-204ENST00000502527 GNPNAT1Q96EK6 184 aaPredicted RBP14.05□□□□□ -0.16
VCAN-204ENST00000502527 OR1A1Q9P1Q5 309 aa14.05□□□□□ -0.16
VCAN-204ENST00000502527 CLCF1Q9UBD9 225 aa14.05□□□□□ -0.16
VCAN-204ENST00000502527 TRAPPC2LQ9UL33 140 aa14.05□□□□□ -0.16
VCAN-204ENST00000502527 RNF115Q9Y4L5 304 aa14.05□□□□□ -0.16
VCAN-204ENST00000502527 A0A1B0GW64 132 aa14.05□□□□□ -0.16
VCAN-204ENST00000502527 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.05□□□□□ -0.16
VCAN-204ENST00000502527 SH2D1BO14796 132 aa14.05□□□□□ -0.16
VCAN-204ENST00000502527 CST7O76096 145 aa14.05□□□□□ -0.16
VCAN-204ENST00000502527 NXPH2O95156 264 aa14.05□□□□□ -0.16
VCAN-204ENST00000502527 PGA5P0DJD9 388 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms