RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 BBIP1A8MTZ0 92 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 EVPLLA8MZ36 301 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 C2orf74A8MZ97 194 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 FAM220BPB1ANY3 271 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 CDX4O14627 284 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 RDH16O75452 317 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 CA11O75493 328 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 LYPLA1O75608 230 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 PIAS1O75925 651 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 SLC22A5O76082 557 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 PPP1R3DO95685 299 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 C1QAP02745 245 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 CD5P06127 495 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 MELTFP08582 738 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 LAMP1P11279 417 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 IGLL1P15814 213 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 IGHV1-2P23083 117 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 GDF1P27539 372 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 RPL12P30050 165 aaKnown RBP3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 SERPINB1P30740 379 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 IL2RGP31785 369 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 PYCR1P32322 319 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 PFN2P35080 140 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 TIMP3P35625 211 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 PPICP45877 212 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 ERFP50548 548 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF140P52738 457 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 TMEM33P57088 247 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 LINC01547P58512 204 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 RPL32P62910 135 aaKnown RBP3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 ARG2P78540 354 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 EMX2Q04743 252 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF763Q0D2J5 394 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 SMAGPQ0VAQ4 97 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 AQP6Q13520 282 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 PPP1R1AQ13522 171 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 FAM53BQ14153 422 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 LTB4RQ15722 352 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 MICAQ29983 383 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 ATP6AP1LQ52LC2 224 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF678Q5SXM1 525 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 C9orf64Q5T6V5 341 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 SLC35E4Q6ICL7 350 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 C11orf71Q6IPW1 123 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 FAM53AQ6NSI3 398 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZFP1Q6P2D0 407 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 FAM131AQ6UXB0 335 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 GDPGP1Q6ZNW5 385 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 SLC51BQ86UW2 128 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 C17orf82Q86X59 251 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 CDC20BQ86Y33 519 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 GPR32P1Q8NGA4 272 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR13C4Q8NGS5 318 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR10X1Q8NGY0 326 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR6K3Q8NGY3 331 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR2V1Q8NHB1 315 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 KCTD4Q8WVF5 259 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 PYDC1Q8WXC3 89 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 TAF15Q92804 592 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 BIRC8Q96P09 236 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 NODALQ96S42 347 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 RIOK2Q9BVS4 552 aaKnown RBP3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 TAPBPLQ9BX59 468 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 SLC17A9Q9BYT1 436 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 TRIM15Q9C019 465 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 SELENOIQ9C0D9 397 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 Q9H521 79 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 SLCO1B3Q9NPD5 702 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 C12orf4Q9NQ89 552 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 BATF3Q9NR55 127 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 VAX2Q9UIW0 290 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 ANXA10Q9UJ72 324 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 NDRG2Q9UN36 371 aaKnown RBP3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF257Q9Y2Q1 563 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 LRRK1Q38SD2 2015 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 PCNX2A6NKB5 2137 aa3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 ASCC3Q8N3C0 2202 aaKnown RBP3.35□□□□□ -1.87
HMGB1P21-201ENST00000502313 ATG2BQ96BY7 2078 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 NUMA1Q14980 2115 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 IGHV1OR15-9A0A0B4J2B8 117 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 METTL15A6NJ78 407 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 DHRS7CA6NNS2 312 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 CEACAM18A8MTB9 384 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 F5H5K5 113 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 LINC01619G3V211 115 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 H7C417 338 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZG16O60844 167 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 POP7O75817 140 aaKnown RBP3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 TNFP01375 233 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 HMGN1P05114 100 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 ZNF806P0C7X5 589 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 PIRTP0C851 137 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 OR5H8P0DN80 308 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 COX4I1P13073 169 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 ADRB3P13945 408 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 PPIBP23284 216 aaKnown RBP3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 SSTR5P35346 364 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 GGT2P36268 569 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 CDKN2DP55273 166 aa3.34□□□□□ -1.87
HMGB1P21-201ENST00000502313 NANOS2P60321 138 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms