RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 S100A6P06703 90 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 OR5H8P0DN80 308 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 MSR1P21757 451 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 NPBWR2P48146 333 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 MTCP1P56278 107 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 CCL7P80098 99 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 ICAM4Q14773 271 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 FAM27BQ5VT28 67 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 TRAT1Q6PIZ9 186 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 ZNF600Q6ZNG1 722 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 Q6ZS52 159 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 LANCL3Q6ZV70 420 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 FAM57BQ71RH2 274 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 ABHD12BQ7Z5M8 362 aaPredicted RBP3.34□□□□□ -1.87
CLTC-209ENST00000498711 SLC35E3Q7Z769 313 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 FBXL14Q8N1E6 418 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 ZIC4Q8N9L1 334 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 WDSUB1Q8N9V3 476 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 GJC3Q8NFK1 279 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 MBD3L1Q8WWY6 194 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 MR1Q95460 341 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 SIGLEC12Q96PQ1 595 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 EMC6Q9BV81 110 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 GGACTQ9BVM4 153 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 METTL9Q9H1A3 318 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 OR2S2Q9NQN1 319 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 PARPBPQ9NWS1 579 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 AK3Q9UIJ7 227 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 ZNF391Q9UJN7 358 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 KCNIP3Q9Y2W7 256 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 PCNX3Q9H6A9 2034 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 PHF3Q92576 2039 aaKnown RBP3.34□□□□□ -1.87
CLTC-209ENST00000498711 ARHGEF17Q96PE2 2063 aaPredicted RBP3.34□□□□□ -1.87
CLTC-209ENST00000498711 NSG1A0A0A6YYJ2 146 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 OR6C6A6NF89 314 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 STMND1H3BQB6 276 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 WISP2O76076 250 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 VAMP5O95183 116 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 F10P00742 488 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 S100A9P06702 114 aaKnown RBP3.34□□□□□ -1.87
CLTC-209ENST00000498711 HCKP08631 526 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 CST2P09228 141 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 ZNF728P0DKX0 622 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 CD38P28907 300 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 CDAP32320 146 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 GLIPR1P48060 266 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 SRPXP78539 464 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 MRPS34P82930 218 aaKnown RBP3.34□□□□□ -1.87
CLTC-209ENST00000498711 EWSR1Q01844 656 aaKnown RBP eCLIP3.34□□□□□ -1.87
CLTC-209ENST00000498711 ZFP36L1Q07352 338 aaKnown RBP3.34□□□□□ -1.87
CLTC-209ENST00000498711 ARFRP1Q13795 201 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 ELOBQ15370 118 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 BEAN1Q3B7T3 259 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 COA6Q5JTJ3 125 aaKnown RBP3.34□□□□□ -1.87
CLTC-209ENST00000498711 C9orf152Q5JTZ5 239 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 ZNF880Q6PDB4 577 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 SAXO1Q8IYX7 474 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 SELENOHQ8IZQ5 122 aaKnown RBP3.34□□□□□ -1.87
CLTC-209ENST00000498711 LMX1AQ8TE12 382 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 GTF3AQ92664 365 aaKnown RBP3.34□□□□□ -1.87
CLTC-209ENST00000498711 CPNE2Q96FN4 548 aaPredicted RBP3.34□□□□□ -1.87
CLTC-209ENST00000498711 TECTBQ96PL2 329 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 SPACA5Q96QH8 159 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 PAPOLGQ9BWT3 736 aaKnown RBP3.34□□□□□ -1.87
CLTC-209ENST00000498711 PLEKHF2Q9H8W4 249 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 PROK2Q9HC23 129 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 NIT2Q9NQR4 276 aa3.34□□□□□ -1.87
CLTC-209ENST00000498711 LAMA5O15230 3695 aa3.34□□□□□ -1.88
CLTC-209ENST00000498711 IGKV1-12A0A0C4DH73 117 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 IGSF23A1L1A6 192 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 SEC14L6B5MCN3 397 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 WRBO00258 174 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 ST8SIA3O43173 380 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 RAMP1O60894 148 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 IFNA10P01566 189 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 IGKV1D-12P01611 117 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 HEXBP07686 556 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 SFTPBP07988 381 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 SNRNP70P08621 437 aaKnown RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 OR5AC1P0C628 307 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 FCGR2AP12318 317 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 SELLP14151 372 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 EDN2P20800 178 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 ITGA3P26006 1051 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 PAX9P55771 341 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 PIGPP57054 158 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 S100A10P60903 97 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 CCL20P78556 96 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 BAXQ07812 192 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 RAB35Q15286 201 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 KHDC3LQ587J8 217 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 NMSQ5H8A3 153 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 OR2B11Q5JQS5 317 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 C6orf201Q7Z4U5 140 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 LYZL2Q7Z4W2 148 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 OR52M1Q8NGK5 317 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 CLDND2Q8NHS1 167 aa3.33□□□□□ -1.88
CLTC-209ENST00000498711 RNASEH2CQ8TDP1 164 aaKnown RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 RTN4IP1Q8WWV3 396 aaPredicted RBP3.33□□□□□ -1.88
CLTC-209ENST00000498711 FAM71F1Q96KD3 344 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms