RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 TOMM34Q15785 309 aaPredicted RBP2.24□□□□□ -2.05
PTPRK-215ENST00000498284 FAM231DQ6ZW35 169 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 TRMT10CQ7L0Y3 403 aaKnown RBP2.24□□□□□ -2.05
PTPRK-215ENST00000498284 CYP4Z2PQ8N1L4 340 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 SYS1Q8N2H4 156 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 SUN5Q8TC36 379 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 LRRC20Q8TCA0 184 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 DOK4Q8TEW6 326 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 RBPMSQ93062 196 aaKnown RBP2.24□□□□□ -2.05
PTPRK-215ENST00000498284 GLT1D1Q96MS3 346 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 OR2A7Q96R45 310 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 ZNF649Q9BS31 505 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 WDR55Q9H6Y2 383 aaPredicted RBP2.24□□□□□ -2.05
PTPRK-215ENST00000498284 ZNHIT6Q9NWK9 470 aaKnown RBP2.24□□□□□ -2.05
PTPRK-215ENST00000498284 UBAP1Q9NZ09 502 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 STMN3Q9NZ72 180 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 VAPAQ9P0L0 249 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 HMGXB4Q9UGU5 601 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 ANXA10Q9UJ72 324 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 SLC22A7Q9Y694 548 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 PLXNA3P51805 1871 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 KMT2EQ8IZD2 1858 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 NAV2Q8IVL1 2488 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 PHIPQ8WWQ0 1821 aa2.24□□□□□ -2.05
PTPRK-215ENST00000498284 EP300Q09472 2414 aaPredicted RBP2.23□□□□□ -2.05
PTPRK-215ENST00000498284 C2orf16Q68DN1 1984 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 TECTAO75443 2155 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 ZNF879B4DU55 563 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 ZNF593O00488 134 aaPredicted RBP2.23□□□□□ -2.05
PTPRK-215ENST00000498284 BRI3O95415 125 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 IGHV1-46P01743 117 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 RLN2P04090 185 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 BGNP21810 368 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 HLA-DMAP28067 261 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 P2RY2P41231 377 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 RANBP1P43487 201 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 TUFMP49411 452 aaKnown RBP2.23□□□□□ -2.05
PTPRK-215ENST00000498284 NUDT2P50583 147 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 SLC18A1P54219 525 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 TNNC1P63316 161 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 STX4Q12846 297 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 FAM53BQ14153 422 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 ELOCQ15369 112 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 VAMP3Q15836 100 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 RESP18Q5W5W9 173 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 KCTD16Q68DU8 428 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 UGT2A3Q6UWM9 527 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 TMEM136Q6ZRR5 245 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 PRNTQ86SH4 94 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 CALHM3Q86XJ0 350 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 FAM9CQ8IZT9 166 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 TRIML2Q8N7C3 387 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 ZDHHC22Q8N966 263 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 C1orf64Q8NEQ6 169 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 OR4D6Q8NGJ1 314 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 RILPQ96NA2 401 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 QKIQ96PU8 341 aaKnown RBP eCLIP2.23□□□□□ -2.051e-7■■■□□ 17.5
PTPRK-215ENST00000498284 SPACA5Q96QH8 159 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 VAT1Q99536 393 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 CIB1Q99828 191 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 SHANK2-AS3Q9BTD1 123 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 SPACA1Q9HBV2 294 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 ABCB9Q9NP78 766 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 TREM1Q9NP99 234 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 ACOT13Q9NPJ3 140 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 C12orf4Q9NQ89 552 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 OR2S2Q9NQN1 319 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 SDHAF3Q9NRP4 125 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 ZNF229Q9UJW7 825 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 C15orf41Q9Y2V0 281 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 KLF13Q9Y2Y9 288 aaPredicted RBP2.23□□□□□ -2.05
PTPRK-215ENST00000498284 INSIG2Q9Y5U4 225 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 ASH1LQ9NR48 2969 aaKnown RBP2.23□□□□□ -2.05
PTPRK-215ENST00000498284 ZFYVE26Q68DK2 2539 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 MYH13Q9UKX3 1938 aa2.23□□□□□ -2.05
PTPRK-215ENST00000498284 ATAD5Q96QE3 1844 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 GCN1Q92616 2671 aaKnown RBP2.22□□□□□ -2.05
PTPRK-215ENST00000498284 ZNF233A6NK53 670 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 IQCF5A8MTL0 148 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 HSBP1L1C9JCN9 74 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 C9JQL5 133 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 PSMD11O00231 422 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 RGS5O15539 181 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 VAPBO95292 243 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 PFN1P07737 140 aaKnown RBP2.22□□□□□ -2.05
PTPRK-215ENST00000498284 SNRPAP09012 282 aaKnown RBP2.22□□□□□ -2.05
PTPRK-215ENST00000498284 TAC1P20366 129 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 ACOT2P49753 483 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 DSTNP60981 165 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 FKBP1AP62942 108 aaKnown RBP2.22□□□□□ -2.05
PTPRK-215ENST00000498284 HSP90B2PQ58FF3 399 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 APOBEC3HQ6NTF7 200 aaKnown RBP2.22□□□□□ -2.05
PTPRK-215ENST00000498284 FAHD1Q6P587 224 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 COPS6Q7L5N1 327 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 CD302Q8IX05 232 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 OR5H2Q8NGV7 314 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 MSANTD3Q96H12 275 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 ATP6V1G3Q96LB4 118 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 SHCBP1LQ9BZQ2 653 aa2.22□□□□□ -2.05
PTPRK-215ENST00000498284 SRRQ9GZT4 340 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms