RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 OR2V1Q8NHB1 315 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 ASB17Q8WXJ9 295 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 DUX3Q96PT4 197 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 SPNS1Q9H2V7 528 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 DMAC2Q9NW81 257 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 GLTPQ9NZD2 209 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 TRAPPC4Q9Y296 219 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 HEBP2Q9Y5Z4 205 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 LRRC37A2A6NM11 1700 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 NFASCO94856 1347 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 TRAV8-2A0A0B4J237 113 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 PDCD6O75340 191 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 DHRS3O75911 302 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 MT-ND4P03905 459 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 GIPP09681 153 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-224ENST00000497488 SPNP16150 400 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 AKR1C4P17516 323 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 MYL12AP19105 171 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 M6PRP20645 277 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 TALDO1P37837 337 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 TMEM33P57088 247 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 TAS2R43P59537 309 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 C16orf72Q14CZ0 275 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 RBMY1FQ15415 496 aaKnown RBP4.48□□□□□ -1.69
BRCA1-224ENST00000497488 TIMM50Q3ZCQ8 353 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 MARC1Q5VT66 337 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 TMEM42Q69YG0 159 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 CGB2Q6NT52 195 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 ZNF613Q6PF04 617 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 DHRS4L2Q6PKH6 230 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 TMED4Q7Z7H5 227 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 SLC25A42Q86VD7 318 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 KLHDC8BQ8IXV7 354 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 PRSS58Q8IYP2 241 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 OR6K3Q8NGY3 331 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 OR10G6Q8NH81 332 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 CCL17Q92583 94 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 MARC2Q969Z3 335 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 TMEM159Q96B96 161 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 FMC1Q96HJ9 113 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 ATOH8Q96SQ7 321 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 NRIP2Q9BQI9 281 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 OR51I1Q9H343 314 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 PCYOX1Q9UHG3 505 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 PRO0628Q9UI54 55 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 ZNF391Q9UJN7 358 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 SLC22A7Q9Y694 548 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 SCN5AQ14524 2016 aa4.48□□□□□ -1.69
BRCA1-224ENST00000497488 ALPK3Q96L96 1907 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 GNG14A0A1W2PPG7 69 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 EVPLLA8MZ36 301 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 CA11O75493 328 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 EPPINO95925 133 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 CCR7P32248 378 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 PRSS3P35030 304 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 APLNRP35414 380 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 SLC18A1P54219 525 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 HERVK_113P61574 105 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 RPL19P84098 196 aaKnown RBP4.47□□□□□ -1.69
BRCA1-224ENST00000497488 GINS1Q14691 196 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 UBALD2Q8IYN6 164 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 WDSUB1Q8N9V3 476 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 OR11L1Q8NGX0 322 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 OR1P1Q8NH06 330 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 ACTRT1Q8TDG2 376 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 CYGBQ8WWM9 190 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 RDH5Q92781 318 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 SMIM8Q96KF7 97 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 HOPXQ9BPY8 73 aaPredicted RBP4.47□□□□□ -1.69
BRCA1-224ENST00000497488 TMEM243Q9BU79 118 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 TIPINQ9BVW5 301 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 MROQ9BYG7 248 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 SAMD10Q9BYL1 202 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 PARP12Q9H0J9 701 aaKnown RBP4.47□□□□□ -1.69
BRCA1-224ENST00000497488 TRABDQ9H4I3 376 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 POMKQ9H5K3 350 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 ASB7Q9H672 318 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 C11orf49Q9H6J7 331 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 LSM5Q9Y4Y9 91 aaKnown RBP4.47□□□□□ -1.69
BRCA1-224ENST00000497488 DNAH12Q6ZR08 3092 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 PLXNA1Q9UIW2 1896 aa4.47□□□□□ -1.69
BRCA1-224ENST00000497488 NRCAMQ92823 1304 aa4.46□□□□□ -1.69
BRCA1-224ENST00000497488 IGKV1-27A0A075B6S5 117 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 FAM183AA6NL82 134 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 C8orf87E5RJ46 101 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 UPK2O00526 184 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 KLRC4O43908 158 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 HAND1O96004 215 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 IFNA14P01570 189 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 CST2P09228 141 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 ZDHHC11BP0C7U3 371 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 POLR2IP36954 125 aaKnown RBP4.46□□□□□ -1.7
BRCA1-224ENST00000497488 CTRLP40313 264 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 ACOT2P49753 483 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 ERFP50548 548 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 IFITM3Q01628 133 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 Q499Y3 187 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 C11orf53Q8IXP5 236 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 TMEM161BQ8NDZ6 487 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 SLC26A10Q8NG04 563 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms