RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 ACTG2P63267 376 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 TSPAN31Q12999 210 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 P2RY6Q15077 328 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 GABRA6Q16445 453 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 ZNF674Q2M3X9 581 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 PGGHGQ32M88 737 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 MS4A18Q3C1V0 323 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 PCGF3Q3KNV8 242 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 SCGB2B2Q4G0G5 96 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 BEX5Q5H9J7 111 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 C9orf135Q5VTT2 229 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 DCAF12L2Q5VW00 463 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 RUSC1-AS1Q66K80 236 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 TMEM225Q6GV28 225 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 ADAM5Q6NVV9 412 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 C1orf94Q6P1W5 598 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 BHLHA15Q7RTS1 189 aaPredicted RBP4.19□□□□□ -1.74
CSMD3-208ENST00000497026 PXKQ7Z7A4 578 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 ZNF100Q8IYN0 542 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 MUC20Q8N307 709 aaPredicted RBP4.19□□□□□ -1.74
CSMD3-208ENST00000497026 GPR137CQ8N3F9 429 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 CCDC54Q8NEL0 328 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 OR4K5Q8NGD3 323 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 OR52L1Q8NGH7 329 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 OR4A4PQ8NGN8 299 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 OR13C3Q8NGS6 347 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 DCUN1D4Q92564 292 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 SLC25A28Q96A46 364 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 ALKBH3Q96Q83 286 aaPredicted RBP4.19□□□□□ -1.74
CSMD3-208ENST00000497026 SLC25A21Q9BQT8 299 aaPredicted RBP4.19□□□□□ -1.74
CSMD3-208ENST00000497026 PBDC1Q9BVG4 233 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 SLCO5A1Q9H2Y9 848 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 PRO1933Q9H354 126 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 C1orf198Q9H425 327 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 TMEM231Q9H6L2 316 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 PARP11Q9NR21 331 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 CACFD1Q9UGQ2 172 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 SLC13A4Q9UKG4 626 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 SLC7A7Q9UM01 511 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 FBXO7Q9Y3I1 522 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 CHTOPQ9Y3Y2 248 aaKnown RBP4.19□□□□□ -1.74
CSMD3-208ENST00000497026 TIMM10BQ9Y5J6 103 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 SLC25A15Q9Y619 301 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 CREBBPQ92793 2442 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 HRNRQ86YZ3 2850 aaPredicted RBP4.19□□□□□ -1.74
CSMD3-208ENST00000497026 ALPK2Q86TB3 2170 aa4.19□□□□□ -1.74
CSMD3-208ENST00000497026 AKAP9Q99996 3911 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 MED13LQ71F56 2210 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 TEX13DA0A0J9YY54 714 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-208ENST00000497026 LOC102725191A0A1B0GVB3 256 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 A0A1W2PPQ1 181 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 A0A1W2PR80 420 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 DPRXA6NFQ7 191 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 TAAR5O14804 337 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 SURF4O15260 269 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 GPRIN2O60269 458 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 UPK3AO75631 287 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 ADAP1O75689 374 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 YIF1AO95070 293 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 OR2C1O95371 312 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 PMP2P02689 132 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 MELTFP08582 738 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 GTF2F2P13984 249 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 ZNF43P17038 809 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 SULT1A1P50225 295 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 CLDN17P56750 224 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 CYCSP99999 105 aaKnown RBP4.18□□□□□ -1.74
CSMD3-208ENST00000497026 BSPH1Q075Z2 132 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 TAF13Q15543 124 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 ZNF74Q16587 644 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 DEFB113Q30KQ7 82 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 ACSM3Q53FZ2 586 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 TIMM23BQ5SRD1 257 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 PHYHD1Q5SRE7 291 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 ACSM5Q6NUN0 579 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 NIPAL3Q6P499 406 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 PODNL1Q6PEZ8 512 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 SLC35D2Q76EJ3 337 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 AAED1Q7RTV5 226 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 PRSS45Q7RTY3 260 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 NR2C2APQ86WQ0 139 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 CDK20Q8IZL9 346 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 TMEM123Q8N131 208 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 HIST3H2BBQ8N257 126 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 BPIFB2Q8N4F0 458 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 WDR31Q8NA23 367 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 LFNGQ8NES3 379 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 OR10H4Q8NGA5 316 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 OR10AD1Q8NGE0 317 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 OR10A7Q8NGE5 316 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 OR51S1Q8NGJ8 323 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 OR51G2Q8NGK0 314 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 OR4C16Q8NGL9 310 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 OR10R2Q8NGX6 335 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 PFN4Q8NHR9 129 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 NEK7Q8TDX7 302 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 TMEM255BQ8WV15 326 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 ASB17Q8WXJ9 295 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 THRSPQ92748 146 aa4.18□□□□□ -1.74
CSMD3-208ENST00000497026 NEUROG1Q92886 237 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms