RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 METTL11BQ5VVY1 283 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 C1orf122Q6ZSJ8 110 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 ZNF554Q86TJ5 538 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 RAB9BQ9NP90 201 aa17.91■□□□□ 0.46
C9orf3-222ENST00000496567 ORC5O43913 435 aa17.9■□□□□ 0.46
C9orf3-222ENST00000496567 CCL3L1P16619 93 aa17.9■□□□□ 0.46
C9orf3-222ENST00000496567 DTYMKP23919 212 aa17.9■□□□□ 0.46
C9orf3-222ENST00000496567 PRSS3P35030 304 aa17.9■□□□□ 0.46
C9orf3-222ENST00000496567 FAHD2BQ6P2I3 314 aaPredicted RBP17.9■□□□□ 0.46
C9orf3-222ENST00000496567 ZNF880Q6PDB4 577 aa17.9■□□□□ 0.46
C9orf3-222ENST00000496567 LINC00299Q6ZSB3 139 aa17.9■□□□□ 0.46
C9orf3-222ENST00000496567 SETD6Q8TBK2 473 aa17.9■□□□□ 0.46
C9orf3-222ENST00000496567 NUDCD2Q8WVJ2 157 aa17.9■□□□□ 0.46
C9orf3-222ENST00000496567 FAHD2AQ96GK7 314 aa17.9■□□□□ 0.46
C9orf3-222ENST00000496567 KCNS2Q9ULS6 477 aa17.9■□□□□ 0.46
C9orf3-222ENST00000496567 CELSR1Q9NYQ6 3014 aa17.89■□□□□ 0.45
C9orf3-222ENST00000496567 TRAV39A0A0B4J263 110 aa17.89■□□□□ 0.45
C9orf3-222ENST00000496567 KBTBD11-OT1A0A1B0GTJ5 212 aa17.89■□□□□ 0.45
C9orf3-222ENST00000496567 FABP12A6NFH5 140 aa17.89■□□□□ 0.45
C9orf3-222ENST00000496567 RBP4P02753 201 aa17.89■□□□□ 0.45
C9orf3-222ENST00000496567 FCGR3AP08637 254 aa17.89■□□□□ 0.45
C9orf3-222ENST00000496567 CGB3P0DN86 165 aa17.89■□□□□ 0.45
C9orf3-222ENST00000496567 CGB7P0DN87 165 aa17.89■□□□□ 0.45
C9orf3-222ENST00000496567 RCC1P18754 421 aaPredicted RBP17.89■□□□□ 0.45
C9orf3-222ENST00000496567 KRTAP1-1Q07627 177 aa17.89■□□□□ 0.45
C9orf3-222ENST00000496567 IL18Q14116 193 aa17.89■□□□□ 0.45
C9orf3-222ENST00000496567 SNX29P2Q8IUI4 249 aa17.89■□□□□ 0.45
C9orf3-222ENST00000496567 CALYQ9NYX4 217 aa17.89■□□□□ 0.45
C9orf3-222ENST00000496567 ABCA1O95477 2261 aa17.89■□□□□ 0.45
C9orf3-222ENST00000496567 C17orf98A8MV24 154 aa17.88■□□□□ 0.45
C9orf3-222ENST00000496567 PTHLHP12272 177 aa17.88■□□□□ 0.45
C9orf3-222ENST00000496567 CBX5P45973 191 aa17.88■□□□□ 0.45
C9orf3-222ENST00000496567 DLX6P56179 175 aa17.88■□□□□ 0.45
C9orf3-222ENST00000496567 MADCAM1Q13477 382 aa17.88■□□□□ 0.45
C9orf3-222ENST00000496567 SRSF7Q16629 238 aaKnown RBP eCLIP17.88■□□□□ 0.45
C9orf3-222ENST00000496567 SPANXN2Q5MJ10 180 aa17.88■□□□□ 0.45
C9orf3-222ENST00000496567 PYHIN1Q6K0P9 492 aa17.88■□□□□ 0.45
C9orf3-222ENST00000496567 CCDC190Q86UF4 302 aa17.88■□□□□ 0.45
C9orf3-222ENST00000496567 C7orf69Q9H7B7 122 aa17.88■□□□□ 0.45
C9orf3-222ENST00000496567 Q9N2K0 584 aa17.88■□□□□ 0.45
C9orf3-222ENST00000496567 AUP1Q9Y679 476 aa17.88■□□□□ 0.45
C9orf3-222ENST00000496567 ZANQ9Y493 2812 aa17.88■□□□□ 0.45
C9orf3-222ENST00000496567 SPINT2O43291 252 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 TOX4O94842 621 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 KIAA2026Q5HYC2 2103 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 ARL11Q969Q4 196 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 SIRPDQ9H106 197 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 METTL8Q9H825 291 aaKnown RBP17.87■□□□□ 0.45
C9orf3-222ENST00000496567 LINC00574Q9H8X3 128 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 SCPEP1Q9HB40 452 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 TAF9BQ9HBM6 251 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 WNK2Q9Y3S1 2297 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 SULT1C2O00338 296 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 SSX5O60225 188 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 C17orf58Q2M2W7 97 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 FAM131AQ6UXB0 335 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 HEPN1Q6WQI6 88 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 ABHD1Q96SE0 405 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 SOSTQ9BQB4 213 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 OCSTAMPQ9BR26 566 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 AKIP1Q9NQ31 210 aa17.87■□□□□ 0.45
C9orf3-222ENST00000496567 ACANP16112 2415 aa17.86■□□□□ 0.45
C9orf3-222ENST00000496567 C12orf77C9JDV5 145 aa17.86■□□□□ 0.45
C9orf3-222ENST00000496567 NPIPB11E5RHQ5 1161 aa17.86■□□□□ 0.45
C9orf3-222ENST00000496567 C15orf65H3BRN8 121 aa17.86■□□□□ 0.45
C9orf3-222ENST00000496567 LPLP06858 475 aa17.86■□□□□ 0.45
C9orf3-222ENST00000496567 SSTR5P35346 364 aa17.86■□□□□ 0.45
C9orf3-222ENST00000496567 ETV6P41212 452 aa17.86■□□□□ 0.45
C9orf3-222ENST00000496567 KIR2DS4P43632 304 aa17.86■□□□□ 0.45
C9orf3-222ENST00000496567 MRPS10P82664 201 aaKnown RBP17.86■□□□□ 0.45
C9orf3-222ENST00000496567 KIR2DS1Q14954 304 aa17.86■□□□□ 0.45
C9orf3-222ENST00000496567 Q6ZPA2 131 aa17.86■□□□□ 0.45
C9orf3-222ENST00000496567 C11orf42Q8N5U0 333 aa17.86■□□□□ 0.45
C9orf3-222ENST00000496567 Q8N7P7 452 aa17.86■□□□□ 0.45
C9orf3-222ENST00000496567 OR10A7Q8NGE5 316 aa17.86■□□□□ 0.45
C9orf3-222ENST00000496567 TMPRSS13Q9BYE2 586 aa17.86■□□□□ 0.45
C9orf3-222ENST00000496567 UNKLQ9H9P5 680 aaKnown RBP17.86■□□□□ 0.45
C9orf3-222ENST00000496567 ZNF230Q9UIE0 474 aaPredicted RBP17.86■□□□□ 0.45
C9orf3-222ENST00000496567 IGHV1-8P0DP01 117 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 MMP9P14780 707 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 PRTN3P24158 256 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 PTBP1P26599 531 aaKnown RBP eCLIP17.85■□□□□ 0.453e-7■□□□□ 8.4
C9orf3-222ENST00000496567 ERVFRD-1P60508 538 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 HLA-DRB3P79483 266 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 HMGN3Q15651 99 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 Q6ZS49 121 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 MFSD4AQ8N468 514 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 PRR18Q8N4B5 295 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 RFESDQ8TAC1 157 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 GPX8Q8TED1 209 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 GCDHQ92947 438 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-222ENST00000496567 SMR3AQ99954 134 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 PCGF1Q9BSM1 259 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 ST6GALNAC5Q9BVH7 336 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 ZNF286AQ9HBT8 521 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 YAE1D1Q9NRH1 226 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 IDI2-AS1Q9NZ38 188 aa17.85■□□□□ 0.45
C9orf3-222ENST00000496567 MEIOCA2RUB1 952 aa17.84■□□□□ 0.45
C9orf3-222ENST00000496567 TRDCB7Z8K6 153 aa17.84■□□□□ 0.45
C9orf3-222ENST00000496567 CTDSPLO15194 276 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms