RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 PDCD10Q9BUL8 212 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 SPNS1Q9H2V7 528 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 REEP1Q9H902 201 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 ACOT13Q9NPJ3 140 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 TMEM216Q9P0N5 145 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 RWDD2AQ9UIY3 292 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 CES1P1Q9UKY3 287 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 ZNF337Q9Y3M9 751 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 V9GYQ6 96 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 LAMA2P24043 3122 aaKnown RBP3.33□□□□□ -1.88
SF3B1-212ENST00000496458 NID2Q14112 1375 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 RANBP2P49792 3224 aaKnown RBP3.33□□□□□ -1.88
SF3B1-212ENST00000496458 DDX60LQ5H9U9 1706 aaKnown RBP3.33□□□□□ -1.88
SF3B1-212ENST00000496458 LAMB1P07942 1786 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 MGAMO43451 1857 aa3.33□□□□□ -1.88
SF3B1-212ENST00000496458 VWA8A3KMH1 1905 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 MCM3APO60318 1980 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 PCM1Q15154 2024 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 KIR2DS1A0A191URI9 304 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 SLC5A10A0PJK1 596 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 C9orf170A2RU37 121 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 M0QZ92 97 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 ZNF593O00488 134 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-212ENST00000496458 KPNA3O00505 521 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-212ENST00000496458 RAD1O60671 282 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 SCO1O75880 301 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 SNAPC5O75971 98 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 CD8AP01732 235 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 C1QBP02746 253 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 CRHP06850 196 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 LIMS3P0CW19 117 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 LIMS4P0CW20 117 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 C8orf88P0DMB2 117 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 HRH1P35367 487 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 CEACAM6P40199 344 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 KIR2DS4P43632 304 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 GPR6P46095 362 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-212ENST00000496458 RAB25P57735 213 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 CD164Q04900 197 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 TWF1Q12792 350 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 MLLT11Q13015 90 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-212ENST00000496458 BTN1A1Q13410 526 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 KIR2DS1Q14954 304 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 TOMM34Q15785 309 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-212ENST00000496458 RFX4Q33E94 735 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 CDNFQ49AH0 187 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 Q5BKY6 102 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 OR10J3Q5JRS4 329 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 C6orf52Q5T4I8 152 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 SYPL2Q5VXT5 272 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 MBOAT2Q6ZWT7 520 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 DPPA2Q7Z7J5 298 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 RDH10Q8IZV5 341 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 PNKDQ8N490 385 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 STX19Q8N4C7 294 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 OR4M2Q8NGB6 313 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 OR10R2Q8NGX6 335 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 SFT2D1Q8WV19 159 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 RBPMSQ93062 196 aaKnown RBP3.32□□□□□ -1.88
SF3B1-212ENST00000496458 HGDQ93099 445 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 UCN3Q969E3 161 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 TMBIM1Q969X1 311 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 EXOSC8Q96B26 276 aaKnown RBP3.32□□□□□ -1.88
SF3B1-212ENST00000496458 PIK3IP1Q96FE7 263 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 MED8Q96G25 268 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 PGLYRP4Q96LB8 373 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 PACRGQ96M98 296 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-212ENST00000496458 THTPAQ9BU02 230 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 SELENOIQ9C0D9 397 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 DSN1Q9H410 356 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 RNF167Q9H6Y7 350 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 RDH14Q9HBH5 336 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 KCNIP1Q9NZI2 227 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 PCYOX1Q9UHG3 505 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 FBXO5Q9UKT4 447 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 BAIAP2Q9UQB8 552 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 TP53TG5Q9Y2B4 290 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 KLF12Q9Y4X4 402 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 OR51B2Q9Y5P1 312 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 WIF1Q9Y5W5 379 aa3.32□□□□□ -1.88
SF3B1-212ENST00000496458 COL11A1P12107 1806 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-212ENST00000496458 ZSWIM8A7E2V4 1837 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 ROBO3Q96MS0 1386 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 KIR2DL5BA0A0G2JN68 375 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 KIR2DL5BA0A0G2JPC4 375 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 PNMA8CA0A1B0GUJ8 204 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 GNG14A0A1W2PPG7 69 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 TMX2-CTNND1H3BSU7 103 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 M0QZK8 103 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 COPEO14579 308 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 MPZL2O60487 215 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 SLC16A7O60669 478 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 UGT2B11O75310 529 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 ZNF324O75467 553 aaPredicted RBP3.31□□□□□ -1.88
SF3B1-212ENST00000496458 BANF1O75531 89 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 OR2B3O76000 313 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 IFNA7P01567 189 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 OR5AL1P0C617 328 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 ADRB3P13945 408 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 CD36P16671 472 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms