RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 ADCY9O60503 1353 aa3.19□□□□□ -1.9
CCDC39-207ENST00000495817 COL18A1P39060 1754 aa3.19□□□□□ -1.9
CCDC39-207ENST00000495817 SVILO95425 2214 aa3.19□□□□□ -1.9
CCDC39-207ENST00000495817 ITSN1Q15811 1721 aa3.19□□□□□ -1.9
CCDC39-207ENST00000495817 TRPM1Q7Z4N2 1603 aa3.19□□□□□ -1.9
CCDC39-207ENST00000495817 CRB1P82279 1406 aa3.19□□□□□ -1.9
CCDC39-207ENST00000495817 POLR3AO14802 1390 aaPredicted RBP3.18□□□□□ -1.9
CCDC39-207ENST00000495817 CPDO75976 1380 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 DHX57Q6P158 1386 aaKnown RBP3.18□□□□□ -1.9
CCDC39-207ENST00000495817 GOLGA6L4A6NEF3 574 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 RNASEK-C17orf49H0YIS7 233 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.18□□□□□ -1.9
CCDC39-207ENST00000495817 GOLGA8MH3BSY2 632 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 TRAPPC3O43617 180 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 ATP5HO75947 161 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 LDOC1O95751 146 aaPredicted RBP3.18□□□□□ -1.9
CCDC39-207ENST00000495817 IGLV7-43P04211 117 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 SEC11BP0C7V7 166 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 GTF2H1P32780 548 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 TTPAP49638 278 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 NUDT2P50583 147 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 ARPC4P59998 168 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 SNCBQ16143 134 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 SSX1Q16384 188 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 Q499Y3 187 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 MRPL2Q5T653 305 aaKnown RBP3.18□□□□□ -1.9
CCDC39-207ENST00000495817 PRR9Q5T870 116 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 HBMQ6B0K9 141 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 CLEC6AQ6EIG7 209 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 Q6ZT83 130 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 ACBD4Q8NC06 268 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 OR4K17Q8NGC6 315 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 OR8A1Q8NGG7 326 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 C22orf15Q8WYQ4 148 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 CHMP6Q96FZ7 201 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 THTPAQ9BU02 230 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 C9orf16Q9BUW7 83 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 PARD6GQ9BYG4 376 aaPredicted RBP3.18□□□□□ -1.9
CCDC39-207ENST00000495817 HDHD2Q9H0R4 259 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 FKBP14Q9NWM8 211 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 TAC3Q9UHF0 121 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 USH1CQ9Y6N9 552 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 NFAT5O94916 1531 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 ABCC6O95255 1503 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 CPSF1Q10570 1443 aaKnown RBP3.18□□□□□ -1.9
CCDC39-207ENST00000495817 TRIP11Q15643 1979 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 TTC21AQ8NDW8 1320 aa3.18□□□□□ -1.9
CCDC39-207ENST00000495817 AKAP12Q02952 1782 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 QRICH2Q9H0J4 1663 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 MAP3K5Q99683 1374 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 COL24A1Q17RW2 1714 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 GMNCA6NCL1 334 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 CLDN34H7C241 214 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 MYO1DO94832 1006 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 IGLV3-19P01714 112 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 IL12BP29460 328 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 CRATP43155 626 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 GCLMP48507 274 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 GDI2P50395 445 aaKnown RBP3.17□□□□□ -1.9
CCDC39-207ENST00000495817 BNIP2Q12982 314 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 TBPL2Q6SJ96 375 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 LYPD1Q8N2G4 141 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 YIPF5Q969M3 257 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 ZNF514Q96K75 400 aaPredicted RBP3.17□□□□□ -1.9
CCDC39-207ENST00000495817 BIRC8Q96P09 236 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 PEBP4Q96S96 227 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 NDEL1Q9GZM8 345 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 TIMM22Q9Y584 194 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 SLC22A7Q9Y694 548 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 NRCAMQ92823 1304 aa3.17□□□□□ -1.9
CCDC39-207ENST00000495817 USP42Q9H9J4 1324 aaKnown RBP3.17□□□□□ -1.9
CCDC39-207ENST00000495817 BTAF1O14981 1849 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 TOGARAM1Q9Y4F4 1720 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 IZUMO1RA6ND01 250 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 RBFOX3A6NFN3 312 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 CD300LBA8K4G0 201 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 CDIPTO14735 213 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 CALUO43852 315 aaPredicted RBP3.16□□□□□ -1.9
CCDC39-207ENST00000495817 OR5AC1P0C628 307 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 NQO2P16083 231 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 HLA-DMAP28067 261 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 RPA3P35244 121 aaPredicted RBP3.16□□□□□ -1.9
CCDC39-207ENST00000495817 TGFBR1P36897 503 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 MAGEA3P43357 314 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 TUFMP49411 452 aaKnown RBP3.16□□□□□ -1.9
CCDC39-207ENST00000495817 UBE2KP61086 200 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 VBP1P61758 197 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 BSXQ3C1V8 233 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 CDKL4Q5MAI5 379 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 SAPCD1Q5SSQ6 148 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 ZNF470Q6ECI4 717 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 CLEC18BQ6UXF7 455 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 TPGS1Q6ZTW0 290 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 DAZ4Q86SG3 579 aaKnown RBP3.16□□□□□ -1.9
CCDC39-207ENST00000495817 MRPL52Q86TS9 123 aaKnown RBP3.16□□□□□ -1.9
CCDC39-207ENST00000495817 C17orf78Q8N4C9 275 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 OR8J2Q8NGG1 315 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 PPP1R14BQ96C90 147 aa3.16□□□□□ -1.9
CCDC39-207ENST00000495817 ZMYND19Q96E35 227 aaPredicted RBP3.16□□□□□ -1.9
CCDC39-207ENST00000495817 YPEL4Q96NS1 127 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms