RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 H3BMQ9 156 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 SPINT2O43291 252 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 IGHV1-69P01742 117 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 CD3GP09693 182 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 CGB3P0DN86 165 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 CGB7P0DN87 165 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 HIST1H1DP16402 221 aaKnown RBP14□□□□□ -0.17
HDAC6-235ENST00000495515 SPCS2Q15005 226 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 MOGAT2Q3SYC2 334 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 UBE2NLQ5JXB2 153 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 ZNF782Q6ZMW2 699 aaPredicted RBP14□□□□□ -0.17
HDAC6-235ENST00000495515 MOB1BQ7L9L4 216 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 SAMD12Q8N8I0 201 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 OR10A7Q8NGE5 316 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 OR4K15Q8NH41 348 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 DYRK2Q92630 601 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 TNFRSF14Q92956 283 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 S100A16Q96FQ6 103 aaKnown RBP14□□□□□ -0.17
HDAC6-235ENST00000495515 CMTM3Q96MX0 182 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 CMSS1Q9BQ75 279 aaKnown RBP14□□□□□ -0.17
HDAC6-235ENST00000495515 ABCG5Q9H222 651 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 LINC00574Q9H8X3 128 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 C12orf4Q9NQ89 552 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 NDUFA13Q9P0J0 144 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 AK3Q9UIJ7 227 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 MGAT4AQ9UM21 535 aa14□□□□□ -0.17
HDAC6-235ENST00000495515 FN1P02751 2386 aaKnown RBP14□□□□□ -0.17
HDAC6-235ENST00000495515 A0A075B6Q4 140 aa13.99□□□□□ -0.17
HDAC6-235ENST00000495515 IGHV3OR16-10A0A075B7F0 116 aa13.99□□□□□ -0.17
HDAC6-235ENST00000495515 SMIM31A0A1B0GVY4 71 aa13.99□□□□□ -0.17
HDAC6-235ENST00000495515 RNASEK-C17orf49H0YIS7 233 aa13.99□□□□□ -0.17
HDAC6-235ENST00000495515 ZNF701M0R085 212 aaPredicted RBP13.99□□□□□ -0.17
HDAC6-235ENST00000495515 IFNA2P01563 188 aa13.99□□□□□ -0.17
HDAC6-235ENST00000495515 C17orf58Q2M2W7 97 aa13.99□□□□□ -0.17
HDAC6-235ENST00000495515 TMEM30BQ3MIR4 351 aa13.99□□□□□ -0.17
HDAC6-235ENST00000495515 PRAMEF5Q5TYX0 476 aa13.99□□□□□ -0.17
HDAC6-235ENST00000495515 C9orf139Q6ZV77 190 aa13.99□□□□□ -0.17
HDAC6-235ENST00000495515 PDZD9Q8IXQ8 264 aa13.99□□□□□ -0.17
HDAC6-235ENST00000495515 MRPL30Q8TCC3 161 aaKnown RBP13.99□□□□□ -0.17
HDAC6-235ENST00000495515 ARL11Q969Q4 196 aa13.99□□□□□ -0.17
HDAC6-235ENST00000495515 SLC25A38Q96DW6 304 aa13.99□□□□□ -0.17
HDAC6-235ENST00000495515 TMEM133Q9H2Q1 129 aa13.99□□□□□ -0.17
HDAC6-235ENST00000495515 MBNL3Q9NUK0 354 aaKnown RBP13.99□□□□□ -0.17
HDAC6-235ENST00000495515 IDI2-AS1Q9NZ38 188 aa13.99□□□□□ -0.17
HDAC6-235ENST00000495515 COMMD3Q9UBI1 195 aa13.99□□□□□ -0.17
HDAC6-235ENST00000495515 RSL24D1Q9UHA3 163 aaKnown RBP13.99□□□□□ -0.17
HDAC6-235ENST00000495515 TRBV6-6A0A0A6YYG2 114 aa13.98□□□□□ -0.17
HDAC6-235ENST00000495515 TRAV39A0A0B4J263 110 aa13.98□□□□□ -0.17
HDAC6-235ENST00000495515 NPIPB11E5RHQ5 1161 aa13.98□□□□□ -0.17
HDAC6-235ENST00000495515 MFNGO00587 321 aa13.98□□□□□ -0.17
HDAC6-235ENST00000495515 NAPSAO96009 420 aa13.98□□□□□ -0.17
HDAC6-235ENST00000495515 GSTP1P09211 210 aaKnown RBP13.98□□□□□ -0.17
HDAC6-235ENST00000495515 GNB3P16520 340 aa13.98□□□□□ -0.17
HDAC6-235ENST00000495515 COX7A1P24310 79 aa13.98□□□□□ -0.17
HDAC6-235ENST00000495515 TALDO1P37837 337 aa13.98□□□□□ -0.17
HDAC6-235ENST00000495515 ARFRP1Q13795 201 aa13.98□□□□□ -0.17
HDAC6-235ENST00000495515 CDNFQ49AH0 187 aa13.98□□□□□ -0.17
HDAC6-235ENST00000495515 RTN4RL2Q86UN3 420 aa13.98□□□□□ -0.17
HDAC6-235ENST00000495515 PNKDQ8N490 385 aa13.98□□□□□ -0.17
HDAC6-235ENST00000495515 SETD6Q8TBK2 473 aa13.98□□□□□ -0.17
HDAC6-235ENST00000495515 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.98□□□□□ -0.17
HDAC6-235ENST00000495515 CCDC59Q9P031 241 aaKnown RBP13.98□□□□□ -0.17
HDAC6-235ENST00000495515 ZNF69Q9UC07 566 aa13.98□□□□□ -0.17
HDAC6-235ENST00000495515 NPFFO15130 113 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 APOA1P02647 267 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 RCC1P18754 421 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-235ENST00000495515 OMGP23515 440 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 NFYBP25208 207 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 SSTR5P35346 364 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 LGALS4P56470 323 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 PITPNAQ00169 270 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 KLRD1Q13241 179 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 PNLIPRP3Q17RR3 467 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 MIDNQ504T8 468 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 RBMS3Q6XE24 437 aaKnown RBP13.97□□□□□ -0.17
HDAC6-235ENST00000495515 BRD3OSQ6XYD6 125 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 RFESDQ8TAC1 157 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 DYNC2LI1Q8TCX1 351 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 KIRREL1Q96J84 757 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 SUCNR1Q9BXA5 334 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 CLEC7AQ9BXN2 247 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 OCEL1Q9H607 264 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 ZMAT3Q9HA38 289 aaKnown RBP13.97□□□□□ -0.17
HDAC6-235ENST00000495515 TAF9BQ9HBM6 251 aa13.97□□□□□ -0.17
HDAC6-235ENST00000495515 TRAV18A0A075B6X5 111 aa13.96□□□□□ -0.17
HDAC6-235ENST00000495515 C12orf77C9JDV5 145 aa13.96□□□□□ -0.17
HDAC6-235ENST00000495515 C15orf65H3BRN8 121 aa13.96□□□□□ -0.17
HDAC6-235ENST00000495515 MMP23AO75900 390 aa13.96□□□□□ -0.17
HDAC6-235ENST00000495515 MNDAP41218 407 aa13.96□□□□□ -0.17
HDAC6-235ENST00000495515 DLX1P56177 255 aa13.96□□□□□ -0.17
HDAC6-235ENST00000495515 PRB3Q04118 309 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-235ENST00000495515 RUSC1-AS1Q66K80 236 aa13.96□□□□□ -0.17
HDAC6-235ENST00000495515 HCP5Q6MZN7 132 aa13.96□□□□□ -0.17
HDAC6-235ENST00000495515 ABHD12Q8N2K0 398 aa13.96□□□□□ -0.17
HDAC6-235ENST00000495515 OR11H6Q8NGC7 330 aa13.96□□□□□ -0.17
HDAC6-235ENST00000495515 OR52M1Q8NGK5 317 aa13.96□□□□□ -0.17
HDAC6-235ENST00000495515 ZNF418Q8TF45 676 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-235ENST00000495515 RBM38Q9H0Z9 239 aaKnown RBP13.96□□□□□ -0.17
HDAC6-235ENST00000495515 KCNK7Q9Y2U2 307 aa13.96□□□□□ -0.17
HDAC6-235ENST00000495515 FAM96BQ9Y3D0 163 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms