RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ABHD17BQ5VST6 288 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 SLC35E3Q7Z769 313 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 YRDCQ86U90 279 aaKnown RBP9.87□□□□□ -0.83
RFC4-214ENST00000494047 TBC1D26Q86UD7 250 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 ZBTB34Q8NCN2 500 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 BHLHE23Q8NDY6 225 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 OR2G3Q8NGZ4 309 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 SECTM1Q8WVN6 248 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 PSMF1Q92530 271 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 PINX1Q96BK5 328 aaKnown RBP9.87□□□□□ -0.83
RFC4-214ENST00000494047 ZNF251Q9BRH9 671 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 SMIM3Q9BZL3 60 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 TUBG2Q9NRH3 451 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 PRR13Q9NZ81 148 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 LHX6Q9UPM6 363 aa9.87□□□□□ -0.83
RFC4-214ENST00000494047 MYO7BQ6PIF6 2116 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 C5orf63A6NC05 138 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 RBFOX3A6NFN3 312 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 C5orf52A6NGY3 159 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 NME2P1O60361 137 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 F10P00742 488 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 SERPINE2P07093 398 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 EDN3P14138 238 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 SELEP16581 610 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 RAB5AP20339 215 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 GNRHRP30968 328 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 SULT1A1P50225 295 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 RRADP55042 308 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 TMPRSS3P57727 454 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 CD81P60033 236 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 HLA-DRB3P79483 266 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 ZNF880Q6PDB4 577 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 MEX3BQ6ZN04 569 aaKnown RBP9.86□□□□□ -0.83
RFC4-214ENST00000494047 MCEMP1Q8IX19 187 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 SPACA3Q8IXA5 215 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 H1FOOQ8IZA3 346 aaPredicted RBP9.86□□□□□ -0.83
RFC4-214ENST00000494047 SELENOHQ8IZQ5 122 aaKnown RBP9.86□□□□□ -0.83
RFC4-214ENST00000494047 TMEM252Q8N6L7 170 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 OR56B2PQ8NGI1 322 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 OR52M1Q8NGK5 317 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 OR10J5Q8NHC4 309 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 FAM213BQ8TBF2 198 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 NEK7Q8TDX7 302 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 HPSE2Q8WWQ2 592 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 APH1AQ96BI3 265 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 P2RX4Q99571 388 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 NIPSNAP3BQ9BS92 247 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 ZNF703Q9H7S9 590 aaPredicted RBP9.86□□□□□ -0.83
RFC4-214ENST00000494047 SLC7A10Q9NS82 523 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 SSUH2Q9Y2M2 353 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 OR2W1Q9Y3N9 320 aa9.86□□□□□ -0.83
RFC4-214ENST00000494047 CHD6Q8TD26 2715 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 ZZEF1O43149 2961 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 AGPAT2O15120 278 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 CELA2AP08217 269 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 ANOS1P23352 680 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 F2RP25116 425 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 OTX2P32243 289 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 HAAOP46952 286 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 B2MP61769 119 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 HGFACQ04756 655 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 SP6Q3SY56 376 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 ZNF506Q5JVG8 444 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 HSD17B11Q8NBQ5 300 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 ZNF775Q96BV0 537 aaPredicted RBP9.85□□□□□ -0.83
RFC4-214ENST00000494047 ZNF837Q96EG3 531 aaPredicted RBP9.85□□□□□ -0.83
RFC4-214ENST00000494047 TP53RKQ96S44 253 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 LIME1Q9H400 295 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 TMEM242Q9NWH2 141 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 LRFN1Q9P244 771 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 LAMP3Q9UQV4 416 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 KLF13Q9Y2Y9 288 aaPredicted RBP9.85□□□□□ -0.83
RFC4-214ENST00000494047 LAMA5O15230 3695 aa9.85□□□□□ -0.83
RFC4-214ENST00000494047 DSPP15924 2871 aaKnown RBP9.84□□□□□ -0.83
RFC4-214ENST00000494047 CELSR3Q9NYQ7 3312 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 J3QT63 122 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 KLK10O43240 276 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 SNRNP70P08621 437 aaKnown RBP9.84□□□□□ -0.83
RFC4-214ENST00000494047 ACAA1P09110 424 aaPredicted RBP9.84□□□□□ -0.83
RFC4-214ENST00000494047 ATP6V0CP27449 155 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 RPL35P42766 123 aaKnown RBP9.84□□□□□ -0.83
RFC4-214ENST00000494047 HABP2Q14520 560 aaPredicted RBP9.84□□□□□ -0.83
RFC4-214ENST00000494047 WIPI1Q5MNZ9 446 aaPredicted RBP9.84□□□□□ -0.83
RFC4-214ENST00000494047 DNLZQ5SXM8 178 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 SLC25A24Q6NUK1 477 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 TMEM182Q6ZP80 229 aaPredicted RBP9.84□□□□□ -0.83
RFC4-214ENST00000494047 C1orf174Q8IYL3 243 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 OR2M7Q8NG81 312 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 OR5C1Q8NGR4 320 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 SCGB1C1Q8TD33 95 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 CD300LFQ8TDQ1 290 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 TVP23CQ96ET8 276 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 ADAT1Q9BUB4 502 aaKnown RBP9.84□□□□□ -0.83
RFC4-214ENST00000494047 RTL8AQ9BWD3 113 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 PRRG4Q9BZD6 226 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 PRORYQ9H606 182 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 GLRX2Q9NS18 164 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 P4HTMQ9NXG6 502 aa9.84□□□□□ -0.83
RFC4-214ENST00000494047 NKX2-6A6NCS4 301 aa9.83□□□□□ -0.84
RFC4-214ENST00000494047 SLC22A20A6NK97 555 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms