RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 NRG4Q8WWG1 115 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 KIRREL1Q96J84 757 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 CYYR1Q96J86 154 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 PRSS22Q9GZN4 317 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 VCXQ9H320 206 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 BANF2Q9H503 90 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 CKLFQ9UBR5 152 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 MRPS28Q9Y2Q9 187 aaKnown RBP8.54□□□□□ -1.04
COL6A3-214ENST00000493608 NOTCH1P46531 2555 aa8.54□□□□□ -1.04
COL6A3-214ENST00000493608 PLXNB1O43157 2135 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 LY6LH3BQJ8 138 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 PEX14O75381 377 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 GTF2F2P13984 249 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 CD34P28906 385 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 BRS3P32247 399 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 SSTR5P35346 364 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 GNG10P50151 68 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 AQP4P55087 323 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 TAS2R43P59537 309 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 DIAPH2-AS1Q14236 149 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 C2orf68Q2NKX9 166 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 NSUN5P1Q3KNT7 163 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 C6orf141Q5SZD1 244 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 TPTE2P1Q5T6R2 138 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 FAM53AQ6NSI3 398 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-214ENST00000493608 OR9G1Q8NH87 305 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 NEK7Q8TDX7 302 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 WDR89Q96FK6 387 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-214ENST00000493608 DERL3Q96Q80 235 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 MMP28Q9H239 520 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 FKBP14Q9NWM8 211 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 PAK1IP1Q9NWT1 392 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-214ENST00000493608 IL36GQ9NZH8 169 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 PSG11Q9UQ72 335 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 ERGIC3Q9Y282 383 aa8.53□□□□□ -1.04
COL6A3-214ENST00000493608 A0A087X0M5 115 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 IGHV3-43A0A0B4J1X8 118 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 A0A1B0GX30 115 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 J3QR06 171 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 IL1AP01583 271 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 CDK1P06493 297 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 IGHV3-43DP0DP04 118 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 CEACAM3P40198 252 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 VDAC2P45880 294 aaPredicted RBP8.52□□□□□ -1.05
COL6A3-214ENST00000493608 GABPB1Q06547 395 aaPredicted RBP8.52□□□□□ -1.05
COL6A3-214ENST00000493608 NHLRC3Q5JS37 347 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 FAM27D1Q5T7N8 215 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 AWAT2Q6E213 333 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 C11orf88Q6PI97 169 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 Q8N2B8 174 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 CAPSLQ8WWF8 208 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 CFHR4Q92496 578 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 ARL11Q969Q4 196 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 SLC25A33Q9BSK2 321 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 TMED9Q9BVK6 235 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 NCOR1P1Q9H4R4 102 aa8.52□□□□□ -1.05
COL6A3-214ENST00000493608 TMEM30CPA0ZSE6 113 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 ERICH4A6NGS2 130 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 NPIPB11E5RHQ5 1161 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 H3BUI4 141 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 ZNF780AO75290 641 aaPredicted RBP8.51□□□□□ -1.05
COL6A3-214ENST00000493608 FBXO24O75426 580 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 CRTAPO75718 401 aaPredicted RBP8.51□□□□□ -1.05
COL6A3-214ENST00000493608 MT-ND4P03905 459 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 LPLP06858 475 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 MNDAP41218 407 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 KCNJ3P48549 501 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 GPR176Q14439 515 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 MED22Q15528 200 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 MPV17LQ2QL34 196 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 ABCA11PQ4W5N1 156 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 ACSM3Q53FZ2 586 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 C5orf24Q7Z6I8 188 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 DTX3Q8N9I9 347 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 TMEM104Q8NE00 496 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 OR4K15Q8NH41 348 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 TOMM40LQ969M1 308 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 FAM46BQ96A09 425 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 RPEQ96AT9 228 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 RBM14Q96PK6 669 aaKnown RBP8.51□□□□□ -1.05
COL6A3-214ENST00000493608 SELENOIQ9C0D9 397 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 IFT22Q9H7X7 185 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 PCDHB16Q9NRJ7 776 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 SCN3BQ9NY72 215 aa8.51□□□□□ -1.05
COL6A3-214ENST00000493608 UBE2QL1A1L167 161 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 MCRIP1C9JLW8 97 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 C15orf65H3BRN8 121 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 OR2F2O95006 317 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 CD1AP06126 327 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 SNRNP70P08621 437 aaKnown RBP8.5□□□□□ -1.05
COL6A3-214ENST00000493608 GZMHP20718 246 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 REG1BP48304 166 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 ARHGDIBP52566 201 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 PAX5Q02548 391 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 HNF4GQ14541 408 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 C9orf152Q5JTZ5 239 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 SYT6Q5T7P8 510 aaPredicted RBP8.5□□□□□ -1.05
COL6A3-214ENST00000493608 OR10K2Q6IF99 312 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 RAB12Q6IQ22 244 aa8.5□□□□□ -1.05
COL6A3-214ENST00000493608 UNQ9370/PRO34162Q6UXP9 181 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms