RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 ERGIC1Q969X5 290 aa8.49□□□□□ -1.05
PRPF3-206ENST00000493553 ABHD14BQ96IU4 210 aa8.49□□□□□ -1.05
PRPF3-206ENST00000493553 DOCK7Q96N67 2140 aa8.49□□□□□ -1.05
PRPF3-206ENST00000493553 HDHD3Q9BSH5 251 aaPredicted RBP8.49□□□□□ -1.05
PRPF3-206ENST00000493553 CABLES2Q9BTV7 478 aa8.49□□□□□ -1.05
PRPF3-206ENST00000493553 OR51B6Q9H340 312 aa8.49□□□□□ -1.05
PRPF3-206ENST00000493553 HEXA-AS1Q9H8Q6 139 aa8.49□□□□□ -1.05
PRPF3-206ENST00000493553 TAAR3PQ9P1P4 343 aa8.49□□□□□ -1.05
PRPF3-206ENST00000493553 TMED3Q9Y3Q3 217 aa8.49□□□□□ -1.05
PRPF3-206ENST00000493553 X6R8D5 127 aa8.49□□□□□ -1.05
PRPF3-206ENST00000493553 ARHGAP21Q5T5U3 1957 aa8.49□□□□□ -1.05
PRPF3-206ENST00000493553 IGHV1-18A0A0C4DH31 117 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 TMEM30CPA0ZSE6 113 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 A8MXE2 369 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 EEF1E1-BLOC1S5C9J1V9 151 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 C16orf97H3BN30 126 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 GPR31O00270 319 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 BCL2L11O43521 198 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 PTBP3O95758 552 aaKnown RBP8.48□□□□□ -1.05
PRPF3-206ENST00000493553 IGHV3-13P01766 116 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 LYL1P12980 280 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 ZNF250P15622 560 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 RPS2P15880 293 aaKnown RBP8.48□□□□□ -1.05
PRPF3-206ENST00000493553 TNFSF4P23510 183 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 PTAFRP25105 342 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 LMO1P25800 156 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 CD200P41217 278 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 KLF3P57682 345 aaPredicted RBP8.48□□□□□ -1.05
PRPF3-206ENST00000493553 SUPT4H1P63272 117 aaKnown RBP8.48□□□□□ -1.05
PRPF3-206ENST00000493553 HLA-DRB3P79483 266 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 PAX5Q02548 391 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 ZNF154Q13106 437 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 SLC9A3R2Q15599 337 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 Q6P435 159 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 PRSS54Q6PEW0 395 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 GFRALQ6UXV0 394 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 OR8H3Q8N146 312 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 TOMM40LQ969M1 308 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 AKR1E2Q96JD6 320 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 FGF23Q9GZV9 251 aaPredicted RBP8.48□□□□□ -1.05
PRPF3-206ENST00000493553 PLEKHA2Q9HB19 425 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 HES4Q9HCC6 221 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 SLC2A9Q9NRM0 540 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 MED9Q9NWA0 146 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 TP53TG5Q9Y2B4 290 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 ZNF835Q9Y2P0 537 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 SPTA1P02549 2419 aa8.48□□□□□ -1.05
PRPF3-206ENST00000493553 SPTBN2O15020 2390 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 USP34Q70CQ2 3546 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 CEP295Q9C0D2 2601 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 MUC3AQ02505 3323 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 IGKV1D-8A0A087WSZ0 117 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 TRAV24A0A0B4J272 114 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 A6NLC8 198 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 RNF212BA8MTL3 300 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 CDIPTO14735 213 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 AGFG2O95081 481 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 CDS2O95674 445 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 SFTPCP11686 197 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 DUSP1P28562 367 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 SSTR2P30874 369 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 TDGF1P3P51864 188 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 IAH1Q2TAA2 248 aaPredicted RBP8.47□□□□□ -1.05
PRPF3-206ENST00000493553 ANKRD55Q3KP44 614 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 C6orf183Q5T699 404 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 SLC35E4Q6ICL7 350 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 ZNF474Q6S9Z5 364 aaPredicted RBP8.47□□□□□ -1.05
PRPF3-206ENST00000493553 TMEM108Q6UXF1 575 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 ZNF497Q6ZNH5 498 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 RTN4RL2Q86UN3 420 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 ZBTB34Q8NCN2 500 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 S100PBPQ96BU1 408 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 LRRC46Q96FV0 321 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 C1orf159Q96HA4 380 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 NCOR1P1Q9H4R4 102 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 TMEM165Q9HC07 324 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 ZDHHC8Q9ULC8 765 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 OR2W1Q9Y3N9 320 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 SVILO95425 2214 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 GTF3C1Q12789 2109 aa8.47□□□□□ -1.05
PRPF3-206ENST00000493553 A0A0C4DFX4 3053 aa8.46□□□□□ -1.05
PRPF3-206ENST00000493553 TRAV14DV4A0A0A6YYC5 116 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 A0A1W2PR80 420 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 HS3ST1O14792 307 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 MPPED1O15442 326 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 ATG12O94817 140 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 OR2H2O95918 312 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 HAND1O96004 215 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 GRPP07492 148 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 AADACP22760 399 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 MPV17P39210 176 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 FABP6P51161 128 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 ZNF83P51522 516 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 FXYD4P59646 89 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 BAMBIQ13145 260 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 EXOSC2Q13868 293 aaKnown RBP8.46□□□□□ -1.06
PRPF3-206ENST00000493553 TMEM187Q14656 261 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 GPR157Q5UAW9 335 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 LDLRAD3Q86YD5 345 aa8.46□□□□□ -1.06
PRPF3-206ENST00000493553 DOLPP1Q86YN1 238 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms