RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 MEX3AA1L020 520 aaKnown RBP11.08□□□□□ -0.64
MSH6-208ENST00000493177 J3QLI3 93 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 GPR37O15354 613 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 FCN3O75636 299 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 TPPPO94811 219 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 MT-ND4P03905 459 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 FCER2P06734 321 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 MELTFP08582 738 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 GATA3P23771 443 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 PTBP1P26599 531 aaKnown RBP eCLIP11.08□□□□□ -0.64
MSH6-208ENST00000493177 ERP29P30040 261 aaKnown RBP11.08□□□□□ -0.64
MSH6-208ENST00000493177 GLP1RP43220 463 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 RPL31P62899 125 aaKnown RBP11.08□□□□□ -0.64
MSH6-208ENST00000493177 LSAMPQ13449 338 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 ZNF846Q147U1 533 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 MRPL30Q8TCC3 161 aaKnown RBP11.08□□□□□ -0.64
MSH6-208ENST00000493177 ZNF418Q8TF45 676 aaPredicted RBP11.08□□□□□ -0.64
MSH6-208ENST00000493177 FCAMRQ8WWV6 532 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 SOSTQ9BQB4 213 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 WDR12Q9GZL7 423 aaKnown RBP11.08□□□□□ -0.64
MSH6-208ENST00000493177 C7orf69Q9H7B7 122 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 AKIP1Q9NQ31 210 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 IFT46Q9NQC8 304 aa11.08□□□□□ -0.64
MSH6-208ENST00000493177 ARHGAP32A7KAX9 2087 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 TRGV10A0A0A0MS01 117 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 hADV38S2A0JD32 116 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 MEIOCA2RUB1 952 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 SULT1C2O00338 296 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 SSX5O60225 188 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 ECDO95905 644 aaPredicted RBP11.07□□□□□ -0.64
MSH6-208ENST00000493177 LPLP06858 475 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 FCGR3AP08637 254 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 CBX5P45973 191 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 MRPS10P82664 201 aaKnown RBP11.07□□□□□ -0.64
MSH6-208ENST00000493177 DGCR2P98153 550 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 ZNF79Q15937 498 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 CD276Q5ZPR3 534 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 MFSD4AQ8N468 514 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 OR52I2Q8NH67 350 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 NANPQ8TBE9 248 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 MRGPRDQ8TDS7 321 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 MAFIPQ8WZ33 124 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 DCTN5Q9BTE1 182 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 ST6GALNAC5Q9BVH7 336 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 SCPEP1Q9HB40 452 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 C19orf12Q9NSK7 152 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 KCNIP1Q9NZI2 227 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 OR6C3Q9NZP0 311 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 ZNF230Q9UIE0 474 aaPredicted RBP11.07□□□□□ -0.64
MSH6-208ENST00000493177 DOCK11Q5JSL3 2073 aa11.07□□□□□ -0.64
MSH6-208ENST00000493177 TRBV23-1A0A0A0MS06 115 aa11.06□□□□□ -0.64
MSH6-208ENST00000493177 GABARAPH6UMI1 98 aa11.06□□□□□ -0.64
MSH6-208ENST00000493177 CTDSPLO15194 276 aa11.06□□□□□ -0.64
MSH6-208ENST00000493177 NAPSAO96009 420 aa11.06□□□□□ -0.64
MSH6-208ENST00000493177 EPHA1P21709 976 aa11.06□□□□□ -0.64
MSH6-208ENST00000493177 DTYMKP23919 212 aa11.06□□□□□ -0.64
MSH6-208ENST00000493177 ZFP36P26651 326 aaKnown RBP11.06□□□□□ -0.64
MSH6-208ENST00000493177 MEF2CQ06413 473 aaPredicted RBP11.06□□□□□ -0.64
MSH6-208ENST00000493177 KRTAP24-1Q3LI83 254 aa11.06□□□□□ -0.64
MSH6-208ENST00000493177 C6orf183Q5T699 404 aa11.06□□□□□ -0.64
MSH6-208ENST00000493177 Q8N402 240 aa11.06□□□□□ -0.64
MSH6-208ENST00000493177 OR13A1Q8NGR1 328 aa11.06□□□□□ -0.64
MSH6-208ENST00000493177 GPX8Q8TED1 209 aa11.06□□□□□ -0.64
MSH6-208ENST00000493177 C19orf24Q9BVV8 132 aa11.06□□□□□ -0.64
MSH6-208ENST00000493177 TMPRSS13Q9BYE2 586 aa11.06□□□□□ -0.64
MSH6-208ENST00000493177 SRRQ9GZT4 340 aa11.06□□□□□ -0.64
MSH6-208ENST00000493177 JMJD1CQ15652 2540 aa11.06□□□□□ -0.64
MSH6-208ENST00000493177 PPIAL4CA0A0B4J2A2 164 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 A8MXK9 166 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 C22orf46C9J442 243 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 RBBP9O75884 186 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 PPIAL4GP0DN37 164 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 RCC1P18754 421 aaPredicted RBP11.05□□□□□ -0.64
MSH6-208ENST00000493177 INPP1P49441 399 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 PAX5Q02548 391 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 ZNF273Q14593 569 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 TMEM200BQ69YZ2 307 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 BTNL3Q6UXE8 466 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 MOB1BQ7L9L4 216 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 GAPTQ8N292 157 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 PRR18Q8N4B5 295 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 GVQW1Q8N7I0 195 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 GDPD1Q8N9F7 314 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 ZNF565Q8N9K5 539 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 SMIM4Q8WVI0 70 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 ZNF286AQ9HBT8 521 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 Q9N2K0 584 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 RPUSD1Q9UJJ7 312 aaKnown RBP11.05□□□□□ -0.64
MSH6-208ENST00000493177 MGAT4AQ9UM21 535 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 AUP1Q9Y679 476 aa11.05□□□□□ -0.64
MSH6-208ENST00000493177 WNK2Q9Y3S1 2297 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 TRBV6-6A0A0A6YYG2 114 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 A0A1W2PPH5 198 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 J3QRK9 145 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 GSTZ1O43708 216 aaPredicted RBP11.04□□□□□ -0.64
MSH6-208ENST00000493177 ENSAO43768 121 aaKnown RBP11.04□□□□□ -0.64
MSH6-208ENST00000493177 RCVRNP35243 200 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 ACTBP60709 375 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 ACTG1P63261 375 aa11.04□□□□□ -0.64
MSH6-208ENST00000493177 HLA-DRB3P79483 266 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms