RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 RNASEK-C17orf49H0YIS7 233 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 SMPD2O60906 423 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 JTBO76095 146 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 PSG2P11465 335 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 TNFSF10P50591 281 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 EWSR1Q01844 656 aaKnown RBP eCLIP10.57□□□□□ -0.72
HMGN1-220ENST00000492280 FOXF2Q12947 444 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 UQCC3Q6UW78 93 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 BTNL8Q6UX41 500 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 TPRX1Q8N7U7 411 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 SCCPDHQ8NBX0 429 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 GLRX2Q9NS18 164 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 GLS2Q9UI32 602 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 PPP1R3CQ9UQK1 317 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 ATP23Q9Y6H3 246 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 GPR37O15354 613 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 NKX2-1P43699 371 aaPredicted RBP10.57□□□□□ -0.72
HMGN1-220ENST00000492280 ZNF154Q13106 437 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 OR2B11Q5JQS5 317 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 LRTM2Q8N967 370 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 CLRN3Q8NCR9 226 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 BOD1Q96IK1 185 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 BCL2L14Q9BZR8 327 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 UFSP2Q9NUQ7 469 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 FAM86C1Q9NVL1 165 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 KCNS2Q9ULS6 477 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 SPTA1P02549 2419 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 CUL9Q8IWT3 2517 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 TAAR5O14804 337 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 CNOT4O95628 575 aaKnown RBP10.57□□□□□ -0.72
HMGN1-220ENST00000492280 OR2H2O95918 312 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 COX5BP10606 129 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 DAOP14920 347 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 CAMLGP49069 296 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 PPP1CBP62140 327 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 ZFP82Q8N141 532 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 Q8NFD4 153 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 OR1J1Q8NGS3 322 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 FAM213BQ8TBF2 198 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 OR51I2Q9H344 312 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 RNF122Q9H9V4 155 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 FBXO7Q9Y3I1 522 aa10.57□□□□□ -0.72
HMGN1-220ENST00000492280 ZGRF1Q86YA3 2104 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 DEGS1O15121 323 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 GPR137BO60478 399 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 WDR1O75083 606 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 FTH1P19P0C7X4 201 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 UCP3P55916 312 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 GNMTQ14749 295 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 TBC1D28Q2M2D7 210 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 ZNF573Q86YE8 665 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 ODF3L1Q8IXM7 274 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 C2CD4CQ8TF44 421 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 RBMXL1Q96E39 390 aaKnown RBP10.56□□□□□ -0.72
HMGN1-220ENST00000492280 PLPPR2Q96GM1 343 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 PLEKHA2Q9HB19 425 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 GP6Q9HCN6 339 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 RBM7Q9Y580 266 aaKnown RBP10.56□□□□□ -0.72
HMGN1-220ENST00000492280 POMT1Q9Y6A1 747 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 ATXN7O15265 892 aaPredicted RBP10.56□□□□□ -0.72
HMGN1-220ENST00000492280 HSPA12AO43301 675 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 TSPAN15O95858 294 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 ZNF14P17017 642 aaPredicted RBP10.56□□□□□ -0.72
HMGN1-220ENST00000492280 UBE2NP61088 152 aaKnown RBP10.56□□□□□ -0.72
HMGN1-220ENST00000492280 TMEM267Q0VDI3 215 aaPredicted RBP10.56□□□□□ -0.72
HMGN1-220ENST00000492280 MPV17LQ2QL34 196 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 OR2C3Q8N628 320 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 UBAC2Q8NBM4 344 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 OR5C1Q8NGR4 320 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 ZDHHC11Q9H8X9 412 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 CDH20Q9HBT6 801 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 MSL2Q9HCI7 577 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 RNF150Q9ULK6 438 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 TMED3Q9Y3Q3 217 aa10.56□□□□□ -0.72
HMGN1-220ENST00000492280 PGLYRP1O75594 196 aaPredicted RBP10.55□□□□□ -0.72
HMGN1-220ENST00000492280 TUSC2O75896 110 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 NXPH2O95156 264 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 P2RY1P47900 373 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 CEBPGP53567 150 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 PSG7Q13046 419 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 PRAMEF6Q5VXH4 476 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 IL34Q6ZMJ4 242 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 Q6ZRM9 215 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 TMEM178AQ8NBL3 297 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 OR10J5Q8NHC4 309 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 EIF5A2Q9GZV4 153 aaKnown RBP10.55□□□□□ -0.72
HMGN1-220ENST00000492280 SAV1Q9H4B6 383 aaPredicted RBP10.55□□□□□ -0.72
HMGN1-220ENST00000492280 PURGQ9UJV8 347 aaKnown RBP10.55□□□□□ -0.72
HMGN1-220ENST00000492280 TPRP12270 2363 aaKnown RBP10.55□□□□□ -0.72
HMGN1-220ENST00000492280 TACC2O95359 2948 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 GAPDHP04406 335 aaKnown RBP10.55□□□□□ -0.72
HMGN1-220ENST00000492280 IAPPP10997 89 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 DYNLT3P51808 116 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 F2RL1P55085 397 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 LINC00205P59089 165 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 HLA-DRB3P79483 266 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 EIF5AL1Q6IS14 154 aaKnown RBP10.55□□□□□ -0.72
HMGN1-220ENST00000492280 Q6P435 159 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 C9orf106Q8NAJ2 232 aa10.55□□□□□ -0.72
HMGN1-220ENST00000492280 RNASE11Q8TAA1 199 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms