RNA–Protein interactions for RNA: ENST00000491769.1

COL6A3-212, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5

Gene COL6A3, Length 6,731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-212ENST00000491769 SPINT1O43278 529 aa11.5□□□□□ -0.57
COL6A3-212ENST00000491769 CTAG2O75638 210 aa11.5□□□□□ -0.57
COL6A3-212ENST00000491769 PIGYQ3MUY2 71 aa11.5□□□□□ -0.57
COL6A3-212ENST00000491769 KHDC3LQ587J8 217 aa11.5□□□□□ -0.57
COL6A3-212ENST00000491769 FAM219BQ5XKK7 198 aa11.5□□□□□ -0.57
COL6A3-212ENST00000491769 ZNF770Q6IQ21 691 aaPredicted RBP11.5□□□□□ -0.57
COL6A3-212ENST00000491769 TEX261Q6UWH6 196 aa11.5□□□□□ -0.57
COL6A3-212ENST00000491769 CHAC2Q8WUX2 184 aa11.5□□□□□ -0.57
COL6A3-212ENST00000491769 ZNF385DQ9H6B1 395 aa11.5□□□□□ -0.57
COL6A3-212ENST00000491769 CCL28Q9NRJ3 127 aa11.5□□□□□ -0.57
COL6A3-212ENST00000491769 PRSS8Q16651 343 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 GBGT1Q8N5D6 347 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 TPRX1Q8N7U7 411 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 PRR13Q9NZ81 148 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 HRKO00198 91 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 CELA2AP08217 269 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 SNRPCP09234 159 aaKnown RBP11.49□□□□□ -0.57
COL6A3-212ENST00000491769 FAM157CP0CG43 387 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 CLDN18P56856 261 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 ERVS71-1P61550 626 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 INSL4Q14641 139 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 NPIPB6E9PJ23 425 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 TTRP02766 147 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 FCARP24071 287 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 HLA-DRB3P79483 266 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 SLC25A53Q5H9E4 307 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 COL13A1Q5TAT6 717 aaPredicted RBP11.49□□□□□ -0.57
COL6A3-212ENST00000491769 OR8A1Q8NGG7 326 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 LOC389332A0A1B0GUA5 103 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 hCG_38984A0A1B0GV85 526 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 SYNGR2O43760 224 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 IL13RA2Q14627 380 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 CXorf66Q5JRM2 361 aaPredicted RBP11.49□□□□□ -0.57
COL6A3-212ENST00000491769 DCAF12L2Q5VW00 463 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 C12orf73Q69YU5 71 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 WDR73Q6P4I2 378 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 ZBTB44Q8NCP5 570 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 ZNF488Q96MN9 340 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 LPAR5Q9H1C0 372 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 KIF13AQ9H1H9 1805 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 PLCH1Q4KWH8 1693 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 ITLN1Q8WWA0 313 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 DYRK2Q92630 601 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 SIRT7Q9NRC8 400 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 HERPUD1Q15011 391 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 PRDM6Q9NQX0 595 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 NRAPQ86VF7 1730 aa11.49□□□□□ -0.57
COL6A3-212ENST00000491769 CACNA1SQ13698 1873 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 OR4C46A6NHA9 309 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 AHRRA9YTQ3 701 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 ZNF735P0CB33 412 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 ATP1A1-AS1Q5TC04 95 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 FAM214BQ7L5A3 538 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 LINC01560Q8TB33 94 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 A0A1W2PRX2 142 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 PRR33A8MZF0 331 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 TMEM229AB2RXF0 380 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 HPXP02790 462 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 FAM53AQ6NSI3 398 aaPredicted RBP11.48□□□□□ -0.57
COL6A3-212ENST00000491769 GLDNQ6ZMI3 551 aaPredicted RBP11.48□□□□□ -0.57
COL6A3-212ENST00000491769 TMEM251Q8N6I4 163 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 NFAM1Q8NET5 270 aaPredicted RBP11.48□□□□□ -0.57
COL6A3-212ENST00000491769 MRAP2Q96G30 205 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 C5orf67F2Z3F1 127 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 RGS13O14921 159 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 SULT1A2P50226 295 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 MESTQ5EB52 335 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 CCL27Q9Y4X3 112 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 ARF6P62330 175 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 MRGPRFQ96AM1 343 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 SLC6A13Q9NSD5 602 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 TMEM127O75204 238 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 UCP2P55851 309 aa11.48□□□□□ -0.57
COL6A3-212ENST00000491769 DHRS7CA6NNS2 312 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 RAB29O14966 203 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 CYB5R3P00387 301 aaPredicted RBP11.47□□□□□ -0.57
COL6A3-212ENST00000491769 HTN3P15516 51 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 RPL27AP46776 148 aaKnown RBP11.47□□□□□ -0.57
COL6A3-212ENST00000491769 OVCH2Q7RTZ1 564 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 BVESQ8NE79 360 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 IGLV3-16A0A075B6K0 115 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 LOC105371242A0A075B767 164 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 C11orf94C9JXX5 98 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 THY1P04216 161 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 TCTAP57738 103 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 ATP5G2Q06055 141 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 ASB13Q8WXK3 278 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 MAP1LC3CQ9BXW4 147 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 KLF7O75840 302 aaPredicted RBP11.47□□□□□ -0.57
COL6A3-212ENST00000491769 OR2D3Q8NGH3 330 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 ZNF502Q8TBZ5 544 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 SRSF10O75494 262 aaKnown RBP11.47□□□□□ -0.57
COL6A3-212ENST00000491769 ZIC1Q15915 447 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 MRPL54Q6P161 138 aaKnown RBP11.47□□□□□ -0.57
COL6A3-212ENST00000491769 ZNF561Q8N587 486 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 OR1K1Q8NGR3 316 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 MANBALQ9NQG1 85 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 SOCS1O15524 211 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 IGKV3-20P01619 116 aa11.47□□□□□ -0.57
COL6A3-212ENST00000491769 MAS1LP35410 378 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms