RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 RUNX1Q01196 453 aa10.25□□□□□ -0.77
USF1-206ENST00000491629 DOC2BQ14184 412 aa10.25□□□□□ -0.77
USF1-206ENST00000491629 AQP12AQ8IXF9 295 aa10.25□□□□□ -0.77
USF1-206ENST00000491629 SAXO1Q8IYX7 474 aa10.25□□□□□ -0.77
USF1-206ENST00000491629 ZNF491Q8N8L2 437 aa10.25□□□□□ -0.77
USF1-206ENST00000491629 ZNF565Q8N9K5 539 aa10.25□□□□□ -0.77
USF1-206ENST00000491629 OR10H4Q8NGA5 316 aa10.25□□□□□ -0.77
USF1-206ENST00000491629 OR13C9Q8NGT0 318 aa10.25□□□□□ -0.77
USF1-206ENST00000491629 OR10X1Q8NGY0 326 aa10.25□□□□□ -0.77
USF1-206ENST00000491629 DCUN1D4Q92564 292 aa10.25□□□□□ -0.77
USF1-206ENST00000491629 RNFT2Q96EX2 444 aa10.25□□□□□ -0.77
USF1-206ENST00000491629 NSL1Q96IY1 281 aa10.25□□□□□ -0.77
USF1-206ENST00000491629 KCTD7Q96MP8 289 aa10.25□□□□□ -0.77
USF1-206ENST00000491629 GON7Q9BXV9 100 aa10.25□□□□□ -0.77
USF1-206ENST00000491629 GNG8Q9UK08 70 aa10.25□□□□□ -0.77
USF1-206ENST00000491629 SIRT4Q9Y6E7 314 aaPredicted RBP10.25□□□□□ -0.77
USF1-206ENST00000491629 MPZL2O60487 215 aa10.24□□□□□ -0.77
USF1-206ENST00000491629 GAPDHP04406 335 aaKnown RBP10.24□□□□□ -0.77
USF1-206ENST00000491629 IGF1P05019 195 aa10.24□□□□□ -0.77
USF1-206ENST00000491629 ISG15P05161 165 aa10.24□□□□□ -0.77
USF1-206ENST00000491629 C21orf33P30042 268 aaPredicted RBP10.24□□□□□ -0.77
USF1-206ENST00000491629 PPIFP30405 207 aaKnown RBP10.24□□□□□ -0.77
USF1-206ENST00000491629 PAX5Q02548 391 aa10.24□□□□□ -0.77
USF1-206ENST00000491629 PAN3Q58A45 887 aaKnown RBP10.24□□□□□ -0.77
USF1-206ENST00000491629 TMEM244Q5VVB8 128 aa10.24□□□□□ -0.77
USF1-206ENST00000491629 CROCCP3Q8IVE0 287 aa10.24□□□□□ -0.77
USF1-206ENST00000491629 GID4Q8IVV7 300 aa10.24□□□□□ -0.77
USF1-206ENST00000491629 OR1N2Q8NGR9 330 aa10.24□□□□□ -0.77
USF1-206ENST00000491629 OR2T10Q8NGZ9 312 aa10.24□□□□□ -0.77
USF1-206ENST00000491629 UBALD1Q8TB05 177 aa10.24□□□□□ -0.77
USF1-206ENST00000491629 CNIH3Q8TBE1 160 aa10.24□□□□□ -0.77
USF1-206ENST00000491629 NRBF2Q96F24 287 aa10.24□□□□□ -0.77
USF1-206ENST00000491629 OR5B12Q96R08 314 aa10.24□□□□□ -0.77
USF1-206ENST00000491629 RHOFQ9HBH0 211 aa10.24□□□□□ -0.77
USF1-206ENST00000491629 ISYNA1Q9NPH2 558 aa10.24□□□□□ -0.77
USF1-206ENST00000491629 WARS2Q9UGM6 360 aaKnown RBP10.24□□□□□ -0.77
USF1-206ENST00000491629 TCRBV3S1A0A5B6 114 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 G3V318 75 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 C15orf65H3BRN8 121 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 SLC31A2O15432 143 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 GP9P14770 177 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 ZNF20P17024 532 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 CD1BP29016 333 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 ZNF616Q08AN1 781 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 ELP2Q6IA86 826 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 FDX2Q6P4F2 183 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 SLC16A12Q6ZSM3 486 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 ZNF429Q86V71 674 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 LINC00311Q8N616 119 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 OR10A7Q8NGE5 316 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 RTN4IP1Q8WWV3 396 aaPredicted RBP10.23□□□□□ -0.77
USF1-206ENST00000491629 DLX4Q92988 240 aaPredicted RBP10.23□□□□□ -0.77
USF1-206ENST00000491629 UBE2E2Q96LR5 201 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 ALX4Q9H161 411 aaPredicted RBP10.23□□□□□ -0.77
USF1-206ENST00000491629 ZMAT4Q9H898 229 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 NEK6Q9HC98 313 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 ZNF580Q9UK33 172 aa10.23□□□□□ -0.77
USF1-206ENST00000491629 MOSP00540 346 aa10.22□□□□□ -0.77
USF1-206ENST00000491629 IGLV1-40P01703 118 aa10.22□□□□□ -0.77
USF1-206ENST00000491629 OR8U8P0C7N1 319 aa10.22□□□□□ -0.77
USF1-206ENST00000491629 TMEM225BP0DP42 221 aa10.22□□□□□ -0.77
USF1-206ENST00000491629 VDAC1P21796 283 aa10.22□□□□□ -0.77
USF1-206ENST00000491629 POLR2IP36954 125 aaKnown RBP10.22□□□□□ -0.77
USF1-206ENST00000491629 KISS1Q15726 138 aa10.22□□□□□ -0.77
USF1-206ENST00000491629 PIGYQ3MUY2 71 aa10.22□□□□□ -0.77
USF1-206ENST00000491629 FAM27D1Q5T7N8 215 aa10.22□□□□□ -0.77
USF1-206ENST00000491629 KDM4DQ6B0I6 523 aa10.22□□□□□ -0.77
USF1-206ENST00000491629 Q8N1Y9 231 aa10.22□□□□□ -0.77
USF1-206ENST00000491629 ZNF184Q99676 751 aaPredicted RBP10.22□□□□□ -0.77
USF1-206ENST00000491629 RASL11BQ9BPW5 248 aa10.22□□□□□ -0.77
USF1-206ENST00000491629 TPSG1Q9NRR2 321 aa10.22□□□□□ -0.77
USF1-206ENST00000491629 IGHV3-43A0A0B4J1X8 118 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 FAM90A10PA6NDY2 464 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 OR4C45A6NMZ5 311 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 J3QRE1 110 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 OVOL1O14753 267 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 SAP30O75446 220 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 IGHV3-43DP0DP04 118 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 SLC2A2P11168 524 aaPredicted RBP10.21□□□□□ -0.77
USF1-206ENST00000491629 SOX6P35712 828 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 MTNR1BP49286 362 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 ZNF134P52741 427 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 SLURP1P55000 103 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 OR10K1Q8NGX5 313 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 EME1Q96AY2 570 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 SLC7A6OSQ96CW6 309 aaPredicted RBP10.21□□□□□ -0.77
USF1-206ENST00000491629 DGCR14Q96DF8 476 aaKnown RBP10.21□□□□□ -0.77
USF1-206ENST00000491629 RITA1Q96K30 269 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 THTPAQ9BU02 230 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 PRRG3Q9BZD7 231 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 BARHL1Q9BZE3 327 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 ZCCHC4Q9H5U6 513 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 KRT84Q9NSB2 600 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 VSIG4Q9Y279 399 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 WSB1Q9Y6I7 421 aa10.21□□□□□ -0.77
USF1-206ENST00000491629 HNRNPCP07910 306 aaKnown RBP eCLIP10.2□□□□□ -0.78
USF1-206ENST00000491629 VEGFCP49767 419 aa10.2□□□□□ -0.78
USF1-206ENST00000491629 ZNF691Q5VV52 312 aa10.2□□□□□ -0.78
USF1-206ENST00000491629 ACSM6Q6P461 480 aa10.2□□□□□ -0.78
USF1-206ENST00000491629 SPATA24Q86W54 205 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms