RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 A0A1B0GW55 424 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 TMEM89A2RUT3 159 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 TMEM235A6NFC5 223 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 K7N7A8 449 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 MFNGO00587 321 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 TNFRSF13BO14836 293 aaPredicted RBP11.24□□□□□ -0.61
CDK9-204ENST00000491521 SIGLEC5O15389 551 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 TK1P04183 234 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 DUX4L2P0CJ85 424 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 DUX4L3P0CJ86 424 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 DUX4L4P0CJ87 422 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 DUX4L5P0CJ88 424 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 DUX4L6P0CJ89 424 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 DUX4L7P0CJ90 424 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 SELLP14151 372 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 PTBP1P26599 531 aaKnown RBP eCLIP11.24□□□□□ -0.61
CDK9-204ENST00000491521 ETV6P41212 452 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 EDDM3AQ14507 147 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 ZNF846Q147U1 533 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 ATXN7L3Q14CW9 347 aaPredicted RBP11.24□□□□□ -0.61
CDK9-204ENST00000491521 PNLIPRP3Q17RR3 467 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 LRRC10Q5BKY1 277 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 DUX4L9Q6RFH8 374 aaPredicted RBP11.24□□□□□ -0.61
CDK9-204ENST00000491521 BRD3OSQ6XYD6 125 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 ZNF841Q6ZN19 808 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 C17orf107Q6ZR85 190 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 GDPD3Q7L5L3 318 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 SETD6Q8TBK2 473 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 FCAMRQ8WWV6 532 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 DYRK2Q92630 601 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 CYYR1Q96J86 154 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 ABHD1Q96SE0 405 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 CMSS1Q9BQ75 279 aaKnown RBP11.24□□□□□ -0.61
CDK9-204ENST00000491521 TNFRSF19Q9NS68 423 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 DUX4Q9UBX2 424 aa11.24□□□□□ -0.61
CDK9-204ENST00000491521 SERPINE3A8MV23 424 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 DVL1O14640 695 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 MGST3O14880 152 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 ENSAO43768 121 aaKnown RBP11.23□□□□□ -0.61
CDK9-204ENST00000491521 ZNF737O75373 536 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 TPPPO94811 219 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 OR3A1P47881 315 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 KCNJ3P48549 501 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 EDDM3BP56851 147 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 AESQ08117 197 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 KRBOX4Q5JUW0 171 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 HACD4Q5VWC8 232 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 RUSC1-AS1Q66K80 236 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 OR8H2Q8N162 312 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 NUDCD2Q8WVJ2 157 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 ST8SIA4Q92187 359 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 H1FXQ92522 213 aaKnown RBP11.23□□□□□ -0.61
CDK9-204ENST00000491521 TAF15Q92804 592 aaKnown RBP eCLIP11.23□□□□□ -0.61
CDK9-204ENST00000491521 UPRTQ96BW1 309 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 SOSTQ9BQB4 213 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 WDR12Q9GZL7 423 aaKnown RBP11.23□□□□□ -0.61
CDK9-204ENST00000491521 FAM234AQ9H0X4 552 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 AKIP1Q9NQ31 210 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 KAAG1Q9UBP8 84 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 SLC25A10Q9UBX3 287 aaPredicted RBP11.23□□□□□ -0.61
CDK9-204ENST00000491521 KCNK7Q9Y2U2 307 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 V9GYH0 126 aa11.23□□□□□ -0.61
CDK9-204ENST00000491521 TMEM30CPA0ZSE6 113 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 FUOMA2VDF0 154 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 MEIS3P1A6NDR6 274 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 MELTFP08582 738 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 PRTN3P24158 256 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 GUCA2AQ02747 115 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 AWAT1Q58HT5 328 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 CD276Q5ZPR3 534 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 TRAPPC6BQ86SZ2 158 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 FGFRL1Q8N441 504 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 MFSD4AQ8N468 514 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 OR4K15Q8NH41 348 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 PLPPR1Q8TBJ4 325 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 CCDC107Q8WV48 283 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 ZDHHC16Q969W1 377 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 DACT3Q96B18 629 aaPredicted RBP11.22□□□□□ -0.61
CDK9-204ENST00000491521 HDHD3Q9BSH5 251 aaPredicted RBP11.22□□□□□ -0.61
CDK9-204ENST00000491521 ST6GALNAC5Q9BVH7 336 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.22□□□□□ -0.61
CDK9-204ENST00000491521 TRAPPC2LQ9UL33 140 aa11.22□□□□□ -0.61
CDK9-204ENST00000491521 MEIKINA0A087WXM9 373 aa11.21□□□□□ -0.61
CDK9-204ENST00000491521 MEIOCA2RUB1 952 aa11.21□□□□□ -0.61
CDK9-204ENST00000491521 CA11O75493 328 aa11.21□□□□□ -0.61
CDK9-204ENST00000491521 RBBP9O75884 186 aa11.21□□□□□ -0.61
CDK9-204ENST00000491521 TOX4O94842 621 aa11.21□□□□□ -0.61
CDK9-204ENST00000491521 FCER2P06734 321 aa11.21□□□□□ -0.61
CDK9-204ENST00000491521 GLIPR1P48060 266 aa11.21□□□□□ -0.61
CDK9-204ENST00000491521 COMPP49747 757 aaPredicted RBP11.21□□□□□ -0.61
CDK9-204ENST00000491521 NPY4RP50391 375 aa11.21□□□□□ -0.61
CDK9-204ENST00000491521 MRPS10P82664 201 aaKnown RBP11.21□□□□□ -0.61
CDK9-204ENST00000491521 SLC9A3R2Q15599 337 aa11.21□□□□□ -0.61
CDK9-204ENST00000491521 GPR157Q5UAW9 335 aa11.21□□□□□ -0.61
CDK9-204ENST00000491521 SLC35E4Q6ICL7 350 aa11.21□□□□□ -0.61
CDK9-204ENST00000491521 BTN2A1Q7KYR7 527 aa11.21□□□□□ -0.61
CDK9-204ENST00000491521 PDZD9Q8IXQ8 264 aa11.21□□□□□ -0.61
CDK9-204ENST00000491521 Q8N402 240 aa11.21□□□□□ -0.61
CDK9-204ENST00000491521 TPRX1Q8N7U7 411 aa11.21□□□□□ -0.61
CDK9-204ENST00000491521 OR52I2Q8NH67 350 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms