RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 FAHD2BQ6P2I3 314 aaPredicted RBP6.29□□□□□ -1.4
CLDN1-202ENST00000490800 Q6P435 159 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 NRARPQ7Z6K4 114 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 LINC00596Q86U02 117 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 MOGAT3Q86VF5 341 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 GVQW1Q8N7I0 195 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 OR10Z1Q8NGY1 313 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 LRRC29Q8WV35 223 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 DYRK2Q92630 601 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 FAHD2AQ96GK7 314 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 DIRC2Q96SL1 478 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 C7orf50Q9BRJ6 194 aaKnown RBP6.29□□□□□ -1.4
CLDN1-202ENST00000490800 FAAP24Q9BTP7 215 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 FN3KRPQ9HA64 309 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 HRASLSQ9HDD0 168 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 RCC2Q9P258 522 aaKnown RBP6.29□□□□□ -1.4
CLDN1-202ENST00000490800 IL19Q9UHD0 177 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 AK3Q9UIJ7 227 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 PLA2G2DQ9UNK4 145 aa6.29□□□□□ -1.4
CLDN1-202ENST00000490800 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.28□□□□□ -1.48e-10■■■■□ 20.2
CLDN1-202ENST00000490800 TRAV24A0A0B4J272 114 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 UBE2QL1A1L167 161 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 SRRM5B3KS81 715 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 DEGS1O15121 323 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 LHBP01229 141 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 MT-ND4P03905 459 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 CSF1P09603 554 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 GLRA1P23415 457 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 SLC6A1P30531 599 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 CBX5P45973 191 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 TAS2R19P59542 299 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 ACTBP60709 375 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 ACTG1P63261 375 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 ARFRP1Q13795 201 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 ZNF146Q15072 292 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 HFEQ30201 348 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 PLA1AQ53H76 456 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 SPIN3Q5JUX0 258 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 ATAD3CQ5T2N8 411 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 CCBE1Q6UXH8 406 aaPredicted RBP6.28□□□□□ -1.4
CLDN1-202ENST00000490800 ETV3LQ6ZN32 361 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 ACP7Q6ZNF0 438 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 TMEM229BQ8NBD8 167 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 CLRN3Q8NCR9 226 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 Q8TCH9 128 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 CCL17Q92583 94 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 HDHD3Q9BSH5 251 aaPredicted RBP6.28□□□□□ -1.4
CLDN1-202ENST00000490800 WDR13Q9H1Z4 485 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 ZNF665Q9H7R5 613 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 SAP30LQ9HAJ7 183 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 GCM1Q9NP62 436 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 TAS2R8Q9NYW2 309 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 ZNF107Q9UII5 783 aaPredicted RBP6.28□□□□□ -1.4
CLDN1-202ENST00000490800 WIPI2Q9Y4P8 454 aa6.28□□□□□ -1.4
CLDN1-202ENST00000490800 FAM240BA0A1B0GVZ2 78 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 NAP1L6A6NFF2 107 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 CENPXA8MT69 81 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 H3BUI4 141 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.27□□□□□ -1.41
CLDN1-202ENST00000490800 VENTXO95231 258 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 OR2H2O95918 312 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 HAND1O96004 215 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 KNG1P01042 644 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 CD74P04233 296 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 CD3DP04234 171 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 GLAP06280 429 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 AKAIN1P0CW23 69 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 DTYMKP23919 212 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 HLA-DMAP28067 261 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 CEBPDP49716 269 aaPredicted RBP6.27□□□□□ -1.41
CLDN1-202ENST00000490800 SRSF3P84103 164 aaKnown RBP6.27□□□□□ -1.41
CLDN1-202ENST00000490800 SMIM21Q3B7S5 101 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 OR52W1Q6IF63 320 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 FAAP20Q6NZ36 180 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 STEAP1BQ6NZ63 245 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 HOGA1Q86XE5 327 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 GCSAMQ8N6F7 178 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 SUMF2Q8NBJ7 301 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 DUSP18Q8NEJ0 188 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 OR4S1Q8NGB4 309 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 OR4D10Q8NGI6 311 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 OR4C16Q8NGL9 310 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 ENKURQ8TC29 256 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 DEDD2Q8WXF8 326 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 MAFIPQ8WZ33 124 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 RAB1CQ92928 201 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 SNAPC3Q92966 411 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 ERGIC1Q969X5 290 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 CMSS1Q9BQ75 279 aaKnown RBP6.27□□□□□ -1.41
CLDN1-202ENST00000490800 DPCDQ9BVM2 203 aaPredicted RBP6.27□□□□□ -1.41
CLDN1-202ENST00000490800 TINAGL1Q9GZM7 467 aaPredicted RBP6.27□□□□□ -1.41
CLDN1-202ENST00000490800 EGLN1Q9GZT9 426 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 MMP28Q9H239 520 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 SPACA1Q9HBV2 294 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 IFT46Q9NQC8 304 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 RASL12Q9NYN1 266 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 NLKQ9UBE8 527 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 RNF7Q9UBF6 113 aa6.27□□□□□ -1.41
CLDN1-202ENST00000490800 ZNF230Q9UIE0 474 aaPredicted RBP6.27□□□□□ -1.41
CLDN1-202ENST00000490800 DYSFO75923 2080 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms