RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 Q8IYB0 196 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 LINC00311Q8N616 119 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 TMEM217Q8N7C4 229 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 TCTEX1D1Q8N7M0 179 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 OR14K1Q8NGZ2 314 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 RITA1Q96K30 269 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 C7orf34Q96L11 122 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 SH3GL1Q99961 368 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 ANKRD60Q9BZ19 345 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 PBOV1Q9GZY1 135 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 COMMD4Q9H0A8 199 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 MED20Q9H944 212 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 EXOSC4Q9NPD3 245 aaKnown RBP5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 ZC4H2Q9NQZ6 224 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 IL20Q9NYY1 176 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 NUFIP1Q9UHK0 495 aaKnown RBP5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 NUBP2Q9Y5Y2 271 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 V9GYS6 101 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 FAT3Q8TDW7 4589 aa5.26□□□□□ -1.57
PDLIM1-203ENST00000490391 TMEM269A0A1B0GVZ9 245 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 PRR32B1ATL7 298 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 M0R2N4 97 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 SLC33A1O00400 549 aaPredicted RBP5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 SELENOFO60613 162 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 PLA2G1BP04054 148 aaKnown RBP5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 RBMY1A1P0DJD3 496 aaKnown RBP5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 CTRB1P17538 263 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 PRKACAP17612 351 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 SSTR5P35346 364 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 ZNF137PP52743 207 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 TPPP2P59282 170 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 TSPAN31Q12999 210 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 RBMS2Q15434 407 aaKnown RBP5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 UBE2V2Q15819 145 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 LTC4SQ16873 150 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 C5orf64Q2M2E5 130 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 LGALS9BQ3B8N2 356 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 TMEM177Q53S58 311 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 CTRB2Q6GPI1 263 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 Q6P435 159 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 FKBP9P1Q75LS8 142 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 SLC15A3Q8IY34 581 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 C8orf31Q8N9H6 132 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 OR51T1Q8NGJ9 327 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 RFESDQ8TAC1 157 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 THEM6Q8WUY1 208 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 RNF141Q8WVD5 230 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 MS4A10Q96PG2 267 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 HMG20AQ9NP66 347 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 CNOT2Q9NZN8 540 aaKnown RBP5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 KIF25Q9UIL4 384 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 FBXL7Q9UJT9 491 aa5.25□□□□□ -1.57
PDLIM1-203ENST00000490391 TMEM120BA0PK00 339 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 DHRS7CA6NNS2 312 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 IGLL5B9A064 214 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 CXCR6O00574 342 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 SRSF10O75494 262 aaKnown RBP5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 OR2A4O95047 310 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 TRBV12-3P01733 135 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 IFNA4P05014 189 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 INAFM2P0DMQ5 153 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 H2AFXP16104 143 aaPredicted RBP5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 ALOX5APP20292 161 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 ACTBP60709 375 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 BNIP1Q12981 228 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 LSAMPQ13449 338 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 DEFB114Q30KQ6 69 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 ACTBL2Q562R1 376 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 Q6ZR54 194 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 RDH10Q8IZV5 341 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 OR10A7Q8NGE5 316 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 C7orf26Q96N11 449 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 CST11Q9H112 138 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 NCOR1P1Q9H4R4 102 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 SLA2Q9H6Q3 261 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 KRT84Q9NSB2 600 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 FBXL17Q9UF56 701 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 GSTK1Q9Y2Q3 226 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 A3GALT2U3KPV4 340 aa5.24□□□□□ -1.57
PDLIM1-203ENST00000490391 PKHD1L1Q86WI1 4243 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 LRP2P98164 4655 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 MEIKINA0A087WXM9 373 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 IGKV1-12A0A0C4DH73 117 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 ANKRD34BA5PLL1 514 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 SH2D1BO14796 132 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 SLC31A2O15432 143 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 NBR2O15453 112 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 TXNL1O43396 289 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 NDUFA3O95167 84 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 IGKV1D-12P01611 117 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 TRGV3P03979 118 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 EDN2P20800 178 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 FUT6P51993 359 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 LINC00205P59089 165 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 CX3CL1P78423 397 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 PAX5Q02548 391 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 GUCA2BQ16661 112 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 MOGAT2Q3SYC2 334 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 AKIRIN2Q53H80 203 aa5.23□□□□□ -1.57
PDLIM1-203ENST00000490391 COQ5Q5HYK3 327 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms