RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 RAB22AQ9UL26 194 aa11.71□□□□□ -0.54
SRGAP3-208ENST00000490348 FAM172BPA6NC97 362 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 ZNF729A6NN14 1252 aaPredicted RBP11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 ODF3BA8MYP8 253 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 NPIPB11E5RHQ5 1161 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 C15orf65H3BRN8 121 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 GABARAPO95166 117 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 OLFML2AQ68BL7 652 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 C5orf24Q7Z6I8 188 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 ANKRD13BQ86YJ7 626 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 ZDHHC22Q8N966 263 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 OR11H6Q8NGC7 330 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 OR4K15Q8NH41 348 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 RFESDQ8TAC1 157 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 MRPL30Q8TCC3 161 aaKnown RBP11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 ARHGAP5-AS1Q96IT6 56 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 KIRREL1Q96J84 757 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 SUCNR1Q9BXA5 334 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 TMEM133Q9H2Q1 129 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 HEXA-AS1Q9H8Q6 139 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 KCNK7Q9Y2U2 307 aa11.7□□□□□ -0.54
SRGAP3-208ENST00000490348 IGHV2-26A0A0B4J1V2 119 aa11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 MEIOCA2RUB1 952 aa11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 RAB27BO00194 218 aa11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 IL1AP01583 271 aa11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 RCC1P18754 421 aaPredicted RBP11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 RAB6AP20340 208 aa11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 PAX6P26367 422 aa11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 GPR107Q5VW38 600 aa11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 FAM53AQ6NSI3 398 aaPredicted RBP11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 OR5H6Q8NGV6 325 aa11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 UBALD1Q8TB05 177 aa11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 LGALS14Q8TCE9 139 aa11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 ZNF418Q8TF45 676 aaPredicted RBP11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 PTX4Q96A99 478 aa11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 HDHD3Q9BSH5 251 aaPredicted RBP11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 PLEKHJ1Q9NW61 149 aa11.69□□□□□ -0.54
SRGAP3-208ENST00000490348 A0A087X0M5 115 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 A0A1B0GX30 115 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 C12orf77C9JDV5 145 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 H3BUI4 141 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 CA11O75493 328 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 NAPSAO96009 420 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 MIDNQ504T8 468 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 IDNKQ5T6J7 187 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 ZNF626Q68DY1 528 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 GPR141Q7Z602 305 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 LHFPL4Q7Z7J7 247 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 OR56B1Q8NGI3 324 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 OR13D1Q8NGV5 346 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 DUX5Q96PT3 197 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 PECRQ9BY49 303 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 ZNF286AQ9HBT8 521 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 MBNL3Q9NUK0 354 aaKnown RBP11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 ZNRD1Q9P1U0 126 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 AK3Q9UIJ7 227 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 HSF4Q9ULV5 492 aa11.68□□□□□ -0.54
SRGAP3-208ENST00000490348 A0A0A6YYJ9 748 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 DNAJC9-AS1A6NH13 148 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 GZMHP20718 246 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 RANBP1P43487 201 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 LTC4SQ16873 150 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 KRTAP21-3Q3LHN1 58 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 Q6YL49 198 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 Q6ZTK2 550 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 DYNAPQ8N1N2 210 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 LEAP2Q969E1 77 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 SLC25A46Q96AG3 418 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 SLC25A38Q96DW6 304 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 TRAPPC2LQ9UL33 140 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 HOXA3O43365 443 aaPredicted RBP11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 ORC5O43913 435 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 IGHV3-7P01780 117 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 ARG1P05089 322 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 MELTFP08582 738 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 NFYBP25208 207 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 CD34P28906 385 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 SERPINB10P48595 397 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 LOXL3P58215 753 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 SLC9A3R2Q15599 337 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 ABHD12Q8N2K0 398 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 OR4P4Q8NGL7 312 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 OR10R2Q8NGX6 335 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 NDNFQ8TB73 568 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 ARL11Q969Q4 196 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 CLEC7AQ9BXN2 247 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 ZMAT3Q9HA38 289 aaKnown RBP11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 IDI2-AS1Q9NZ38 188 aa11.67□□□□□ -0.54
SRGAP3-208ENST00000490348 MFNGO00587 321 aa11.66□□□□□ -0.54
SRGAP3-208ENST00000490348 IGLV1-47P01700 117 aa11.66□□□□□ -0.54
SRGAP3-208ENST00000490348 GNB3P16520 340 aa11.66□□□□□ -0.54
SRGAP3-208ENST00000490348 RPL5P46777 297 aaKnown RBP11.66□□□□□ -0.54
SRGAP3-208ENST00000490348 BAMBIQ13145 260 aa11.66□□□□□ -0.54
SRGAP3-208ENST00000490348 DYNC1I2Q13409 638 aaKnown RBP11.66□□□□□ -0.54
SRGAP3-208ENST00000490348 KRTAP24-1Q3LI83 254 aa11.66□□□□□ -0.54
SRGAP3-208ENST00000490348 OR52W1Q6IF63 320 aa11.66□□□□□ -0.54
SRGAP3-208ENST00000490348 ZNF880Q6PDB4 577 aa11.66□□□□□ -0.54
SRGAP3-208ENST00000490348 RBMS3Q6XE24 437 aaKnown RBP11.66□□□□□ -0.54
SRGAP3-208ENST00000490348 LDLRAD3Q86YD5 345 aa11.66□□□□□ -0.54
SRGAP3-208ENST00000490348 OR1L1Q8NH94 360 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms