RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 COQ2Q96H96 371 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 DCTN5Q9BTE1 182 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 ST6GALNAC5Q9BVH7 336 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 C12orf4Q9NQ89 552 aa11.78□□□□□ -0.52
CLDN11-209ENST00000489485 MEIKINA0A087WXM9 373 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 TRAV39A0A0B4J263 110 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 A0A1W2PQ09 198 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 C22orf46C9J442 243 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 TGFAP01135 160 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 MSMBP08118 114 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 IGHV4-31P0DP07 118 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 GZMKP49863 264 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 P2RX3P56373 397 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 ZNF497Q6ZNH5 498 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 FAM185AQ8N0U4 392 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 SETD6Q8TBK2 473 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 CCDC107Q8WV48 283 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 C18orf12Q96KH6 178 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 SCPEP1Q9HB40 452 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 C19orf12Q9NSK7 152 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 KIF25Q9UIL4 384 aa11.77□□□□□ -0.53
CLDN11-209ENST00000489485 RPUSD1Q9UJJ7 312 aaKnown RBP11.77□□□□□ -0.53
CLDN11-209ENST00000489485 PPIAL4CA0A0B4J2A2 164 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 ORC5O43913 435 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 CA11O75493 328 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 RBBP9O75884 186 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 NAPSAO96009 420 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 PPIAL4GP0DN37 164 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 ERP29P30040 261 aaKnown RBP11.76□□□□□ -0.53
CLDN11-209ENST00000489485 RSBN1Q5VWQ0 802 aaPredicted RBP11.76□□□□□ -0.53
CLDN11-209ENST00000489485 STEAP3Q658P3 488 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 Q6ZPA2 131 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 MRPL30Q8TCC3 161 aaKnown RBP11.76□□□□□ -0.53
CLDN11-209ENST00000489485 MMP26Q9NRE1 261 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 TRBV23-1A0A0A0MS06 115 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 TMEM30CPA0ZSE6 113 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 ODAMA1E959 279 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 SULT1C2O00338 296 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 GSTZ1O43708 216 aaPredicted RBP11.76□□□□□ -0.53
CLDN11-209ENST00000489485 MT-ND4P03905 459 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 FCGR3AP08637 254 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 RCC1P18754 421 aaPredicted RBP11.76□□□□□ -0.53
CLDN11-209ENST00000489485 CYB5R2Q6BCY4 276 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 SLC35E4Q6ICL7 350 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 AKAP14Q86UN6 197 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 CHAC2Q8WUX2 184 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 C1orf159Q96HA4 380 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 OCSTAMPQ9BR26 566 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 IFT46Q9NQC8 304 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 MTFP1Q9UDX5 166 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 HIVEP1P15822 2718 aa11.76□□□□□ -0.53
CLDN11-209ENST00000489485 hADV38S2A0JD32 116 aa11.75□□□□□ -0.53
CLDN11-209ENST00000489485 ENSAO43768 121 aaKnown RBP11.75□□□□□ -0.53
CLDN11-209ENST00000489485 IL7P13232 177 aa11.75□□□□□ -0.53
CLDN11-209ENST00000489485 GDNFP39905 211 aa11.75□□□□□ -0.53
CLDN11-209ENST00000489485 TRIQKQ629K1 86 aa11.75□□□□□ -0.53
CLDN11-209ENST00000489485 TMEM200BQ69YZ2 307 aa11.75□□□□□ -0.53
CLDN11-209ENST00000489485 OR52W1Q6IF63 320 aa11.75□□□□□ -0.53
CLDN11-209ENST00000489485 ZNF565Q8N9K5 539 aa11.75□□□□□ -0.53
CLDN11-209ENST00000489485 TMEM186Q96B77 213 aa11.75□□□□□ -0.53
CLDN11-209ENST00000489485 RIMS4Q9H426 269 aaPredicted RBP11.75□□□□□ -0.53
CLDN11-209ENST00000489485 HIF1ANQ9NWT6 349 aa11.75□□□□□ -0.53
CLDN11-209ENST00000489485 TRAPPC2LQ9UL33 140 aa11.75□□□□□ -0.53
CLDN11-209ENST00000489485 POLR3KQ9Y2Y1 108 aaPredicted RBP11.75□□□□□ -0.53
CLDN11-209ENST00000489485 TRGV10A0A0A0MS01 117 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 IGHV2-70DA0A0C4DH43 119 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 LIPFP07098 398 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 CD99P14209 185 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 ZNF16P17020 682 aaPredicted RBP11.74□□□□□ -0.53
CLDN11-209ENST00000489485 GLP1RP43220 463 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 PAX5Q02548 391 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 MEF2CQ06413 473 aaPredicted RBP11.74□□□□□ -0.53
CLDN11-209ENST00000489485 BTNL3Q6UXE8 466 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 C5orf24Q7Z6I8 188 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 GAPTQ8N292 157 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 TRIM63Q969Q1 353 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 OR6C3Q9NZP0 311 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 LPAR3Q9UBY5 353 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 RBMX2Q9Y388 322 aaKnown RBP11.74□□□□□ -0.53
CLDN11-209ENST00000489485 IGKV1D-8A0A087WSZ0 117 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 TRAV20A0A0B4J274 112 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 LINC00854A0A1B0GVQ3 168 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 DTYMKP23919 212 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 HLA-DMAP28067 261 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 CBX5P45973 191 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 INPP1P49441 399 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 ACTBP60709 375 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 ACTG1P63261 375 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 PAX2Q02962 417 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 ZNF273Q14593 569 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 DCAF12L2Q5VW00 463 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 FAHD2BQ6P2I3 314 aaPredicted RBP11.74□□□□□ -0.53
CLDN11-209ENST00000489485 GLCCI1Q86VQ1 547 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 C8orf46Q8TAG6 207 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 MRGPRDQ8TDS7 321 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 SNAPC3Q92966 411 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 FAHD2AQ96GK7 314 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 Q9N2K0 584 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 ONECUT1Q9UBC0 465 aa11.74□□□□□ -0.53
CLDN11-209ENST00000489485 LINC00312Q9Y6C7 94 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms