RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 MARCH1Q8TCQ1 289 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 MRGPRDQ8TDS7 321 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 NINJ1Q92982 152 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 TOMM40LQ969M1 308 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 KIRREL1Q96J84 757 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 CCL19Q99731 98 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 CHODLQ9H9P2 273 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 OR6C3Q9NZP0 311 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 SLC25A10Q9UBX3 287 aaPredicted RBP8.35□□□□□ -1.07
USP11-211ENST00000489111 ZNF69Q9UC07 566 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 PCDHB10Q9UN67 800 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 C14orf166Q9Y224 244 aaKnown RBP8.35□□□□□ -1.07
USP11-211ENST00000489111 FAM208BQ5VWN6 2430 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 PLCE1Q9P212 2302 aa8.35□□□□□ -1.07
USP11-211ENST00000489111 CHD6Q8TD26 2715 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 A0A1B0GW55 424 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 C7orf66A4D0T2 115 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 OR5H14A6NHG9 310 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 C12orf77C9JDV5 145 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 SSNA1O43805 119 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 CREBL2O60519 120 aaPredicted RBP8.34□□□□□ -1.07
USP11-211ENST00000489111 LY6HO94772 140 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 FSTL3O95633 263 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 IGHV2-70P01814 119 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 IL5P05113 134 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 DUX4L2P0CJ85 424 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 DUX4L3P0CJ86 424 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 DUX4L4P0CJ87 422 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 DUX4L5P0CJ88 424 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 DUX4L6P0CJ89 424 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 DUX4L7P0CJ90 424 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 AADACP22760 399 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 NFYAP23511 347 aaPredicted RBP8.34□□□□□ -1.07
USP11-211ENST00000489111 ERP29P30040 261 aaKnown RBP8.34□□□□□ -1.07
USP11-211ENST00000489111 BAMBIQ13145 260 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 HERPUD1Q15011 391 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 ABCA11PQ4W5N1 156 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 AVPI1Q5T686 147 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 AADACL3Q5VUY0 350 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 SP5Q6BEB4 398 aaPredicted RBP8.34□□□□□ -1.07
USP11-211ENST00000489111 DUX4L9Q6RFH8 374 aaPredicted RBP8.34□□□□□ -1.07
USP11-211ENST00000489111 DHRS11Q6UWP2 260 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 NLRC3Q7RTR2 1065 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 LHFPL1Q86WI0 220 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 ZNF565Q8N9K5 539 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 OR13A1Q8NGR1 328 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 ZFAND1Q8TCF1 268 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 MOB3AQ96BX8 217 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 GALMQ96C23 342 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 C14orf79Q96F83 325 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 LURAP1Q96LR2 239 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 TMEM246Q9BRR3 403 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 TMPRSS13Q9BYE2 586 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 FXYD6Q9H0Q3 95 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 OR51J1Q9H342 316 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 NCOR1P1Q9H4R4 102 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 PLEKHF2Q9H8W4 249 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 DUX4Q9UBX2 424 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 LPAR3Q9UBY5 353 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 SLC23A1Q9UHI7 598 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 VSIG4Q9Y279 399 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 USP9XQ93008 2570 aaPredicted RBP8.34□□□□□ -1.07
USP11-211ENST00000489111 FLNCQ14315 2725 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 HCFC1P51610 2035 aa8.34□□□□□ -1.07
USP11-211ENST00000489111 TRBV6-7A0A0A0MS04 114 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 A0A0A6YYJ9 748 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 IGKV1-6A0A0C4DH72 117 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 hADV38S2A0JD32 116 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 CEACAM18A8MTB9 384 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 NPIPB11E5RHQ5 1161 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 F12P00748 615 aaPredicted RBP8.33□□□□□ -1.08
USP11-211ENST00000489111 PPYP01298 95 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 HBZP02008 142 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 RPS2P15880 293 aaKnown RBP8.33□□□□□ -1.08
USP11-211ENST00000489111 GZMHP20718 246 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 ZBTB25P24278 435 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 SSTR5P35346 364 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 MECP2P51608 486 aaKnown RBP8.33□□□□□ -1.08
USP11-211ENST00000489111 ZNF660Q6AZW8 331 aaPredicted RBP8.33□□□□□ -1.08
USP11-211ENST00000489111 C11orf88Q6PI97 169 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 GLDNQ6ZMI3 551 aaPredicted RBP8.33□□□□□ -1.08
USP11-211ENST00000489111 AKAP14Q86UN6 197 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 SLC38A6Q8IZM9 456 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 SPICQ8N5J4 248 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 OR1L1Q8NH94 360 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 UBALD1Q8TB05 177 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 H1FXQ92522 213 aaKnown RBP8.33□□□□□ -1.08
USP11-211ENST00000489111 ARL11Q969Q4 196 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 MRGPRFQ96AM1 343 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 SEC22CQ9BRL7 303 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 ALX4Q9H161 411 aaPredicted RBP8.33□□□□□ -1.08
USP11-211ENST00000489111 MED28Q9H204 178 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 OR1A1Q9P1Q5 309 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 KAAG1Q9UBP8 84 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 OPN4Q9UHM6 478 aa8.33□□□□□ -1.08
USP11-211ENST00000489111 HEATR1Q9H583 2144 aaKnown RBP8.33□□□□□ -1.08
USP11-211ENST00000489111 MEX3AA1L020 520 aaKnown RBP8.32□□□□□ -1.08
USP11-211ENST00000489111 SNRPGP15A8MWD9 76 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 OVOL3O00110 214 aa8.32□□□□□ -1.08
USP11-211ENST00000489111 DVL1O14640 695 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms