RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 NUP153P49790 1475 aaKnown RBP1.61□□□□□ -2.15
RFC4-213ENST00000489028 SVILO95425 2214 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 SETD1AO15047 1707 aaKnown RBP1.6□□□□□ -2.15
RFC4-213ENST00000489028 SHROOM3Q8TF72 1996 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 IGKV3D-11A0A0A0MRZ8 115 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 VGLL3A8MV65 326 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 C16orf90A8MZG2 172 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 C8orf87E5RJ46 101 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 F5H5P2 479 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 ISLRO14498 428 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 COCHO43405 550 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 STX10O60499 249 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 E2F6O75461 281 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 ADAP1O75689 374 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 EPPINO95925 133 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 OCM2P0CE71 109 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 CFL1P23528 166 aaKnown RBP1.6□□□□□ -2.15
RFC4-213ENST00000489028 MAGEA2P43356 314 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 INPP1P49441 399 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 GDI2P50395 445 aaKnown RBP1.6□□□□□ -2.15
RFC4-213ENST00000489028 MP68P56378 58 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 RAB2AP61019 212 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 SKP2Q13309 424 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 ZNF235Q14590 738 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 MMDQ15546 238 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 TBC1D28Q2M2D7 210 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 SLC36A2Q495M3 483 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 TMEM69Q5SWH9 247 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 PAGE2Q7Z2X7 111 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 LRP11Q86VZ4 500 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 TMEM251Q8N6I4 163 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 OR11L1Q8NGX0 322 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 OR5K1Q8NHB7 308 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 DNAJB3Q8WWF6 145 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 PYURFQ96I23 114 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 TRIB3Q96RU7 358 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 TMEM208Q9BTX3 173 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 BCL2L14Q9BZR8 327 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 CHST5Q9GZS9 411 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 TXNIPQ9H3M7 391 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 METTL17Q9H7H0 456 aaPredicted RBP1.6□□□□□ -2.15
RFC4-213ENST00000489028 PLEKHJ1Q9NW61 149 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 TMEM216Q9P0N5 145 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 BTRCQ9Y297 605 aa1.6□□□□□ -2.15
RFC4-213ENST00000489028 BAZ2AQ9UIF9 1905 aaKnown RBP1.6□□□□□ -2.15
RFC4-213ENST00000489028 NID2Q14112 1375 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 ATRNO75882 1429 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 RPRD2Q5VT52 1461 aaKnown RBP1.59□□□□□ -2.15
RFC4-213ENST00000489028 ARGFXA6NJG6 315 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.59□□□□□ -2.15
RFC4-213ENST00000489028 SSNA1O43805 119 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 CRTAPO75718 401 aaPredicted RBP1.59□□□□□ -2.15
RFC4-213ENST00000489028 DEXIO95424 95 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 FSTL3O95633 263 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 GPR75O95800 540 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 APOEP02649 317 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 PFN1P07737 140 aaKnown RBP1.59□□□□□ -2.15
RFC4-213ENST00000489028 GUSBP08236 651 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 KRT7P08729 469 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 CD99P14209 185 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 S100A2P29034 98 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 AGTR1P30556 359 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 MAGOHP61326 146 aaKnown RBP1.59□□□□□ -2.15
RFC4-213ENST00000489028 RBX1P62877 108 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 UBE2IP63279 158 aaKnown RBP1.59□□□□□ -2.15
RFC4-213ENST00000489028 FMODQ06828 376 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 PDZD11Q5EBL8 140 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 CENPWQ5EE01 88 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 HENMT1Q5T8I9 393 aaKnown RBP1.59□□□□□ -2.15
RFC4-213ENST00000489028 PTRHD1Q6GMV3 140 aaKnown RBP1.59□□□□□ -2.15
RFC4-213ENST00000489028 ELP2Q6IA86 826 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 DNM1P34Q6PK57 102 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 ZBTB8OSQ8IWT0 167 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 CPNE9Q8IYJ1 553 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 FER1L6-AS1Q8NA97 138 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 ZNF680Q8NEM1 530 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 TAMM41Q96BW9 452 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 CMBLQ96DG6 245 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 SMIM19Q96E16 107 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 REEP6Q96HR9 211 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 SHANK2-AS3Q9BTD1 123 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 VSIRQ9H7M9 311 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 UBQLN4Q9NRR5 601 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 GLS2Q9UI32 602 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 NAGKQ9UJ70 344 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 SNX10Q9Y5X0 201 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 MTCH2Q9Y6C9 303 aa1.59□□□□□ -2.15
RFC4-213ENST00000489028 SEC16AO15027 2179 aa1.59□□□□□ -2.16
RFC4-213ENST00000489028 F5H5T6 163 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 M0QYV0 167 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 SLC16A4O15374 487 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 PSMG1O95456 288 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 ASS1P00966 412 aaKnown RBP1.58□□□□□ -2.16
RFC4-213ENST00000489028 PDYNP01213 254 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 IGHG2P01859 326 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 UGT2B7P16662 529 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 GADD45AP24522 165 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 ADORA1P30542 326 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 GRPRP30550 384 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 CD79BP40259 229 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms