RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 TGIF2LXQ8IUE1 241 aa14.5□□□□□ -0.09
HDAC6-231ENST00000488905 Q8N6K4 173 aa14.5□□□□□ -0.09
HDAC6-231ENST00000488905 OR52I1Q8NGK6 324 aa14.5□□□□□ -0.09
HDAC6-231ENST00000488905 EAF1Q96JC9 268 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-231ENST00000488905 WWC2-AS2Q96NR7 200 aa14.5□□□□□ -0.09
HDAC6-231ENST00000488905 DUX3Q96PT4 197 aa14.5□□□□□ -0.09
HDAC6-231ENST00000488905 IL36GQ9NZH8 169 aa14.5□□□□□ -0.09
HDAC6-231ENST00000488905 DNAH7Q8WXX0 4024 aa14.49□□□□□ -0.09
HDAC6-231ENST00000488905 TMEM30CPA0ZSE6 113 aa14.49□□□□□ -0.09
HDAC6-231ENST00000488905 AP4M1O00189 453 aa14.49□□□□□ -0.09
HDAC6-231ENST00000488905 CDRT1O95170 752 aa14.49□□□□□ -0.09
HDAC6-231ENST00000488905 GAPDHP04406 335 aaKnown RBP14.49□□□□□ -0.09
HDAC6-231ENST00000488905 GPR12P47775 334 aa14.49□□□□□ -0.09
HDAC6-231ENST00000488905 TEX38Q6PEX7 206 aa14.49□□□□□ -0.09
HDAC6-231ENST00000488905 UNQ9370/PRO34162Q6UXP9 181 aa14.49□□□□□ -0.09
HDAC6-231ENST00000488905 LINC00596Q86U02 117 aa14.49□□□□□ -0.09
HDAC6-231ENST00000488905 LINC00311Q8N616 119 aa14.49□□□□□ -0.09
HDAC6-231ENST00000488905 RHOXF1Q8NHV9 184 aa14.49□□□□□ -0.09
HDAC6-231ENST00000488905 GPR148Q8TDV2 347 aa14.49□□□□□ -0.09
HDAC6-231ENST00000488905 TMEM106AQ96A25 262 aa14.49□□□□□ -0.09
HDAC6-231ENST00000488905 RAX2Q96IS3 184 aa14.49□□□□□ -0.09
HDAC6-231ENST00000488905 METTL9Q9H1A3 318 aa14.49□□□□□ -0.09
HDAC6-231ENST00000488905 ABCG5Q9H222 651 aa14.49□□□□□ -0.09
HDAC6-231ENST00000488905 LIN7CQ9NUP9 197 aaKnown RBP14.49□□□□□ -0.09
HDAC6-231ENST00000488905 ZMAT5Q9UDW3 170 aaKnown RBP14.49□□□□□ -0.09
HDAC6-231ENST00000488905 STAB2Q8WWQ8 2551 aa14.48□□□□□ -0.09
HDAC6-231ENST00000488905 LINC01548A6NM66 108 aa14.48□□□□□ -0.09
HDAC6-231ENST00000488905 NCBP2LA6PVI3 153 aaKnown RBP14.48□□□□□ -0.09
HDAC6-231ENST00000488905 C15orf65H3BRN8 121 aa14.48□□□□□ -0.09
HDAC6-231ENST00000488905 SDCBPO00560 298 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-231ENST00000488905 GEMIN2O14893 280 aaKnown RBP14.48□□□□□ -0.09
HDAC6-231ENST00000488905 LIMS3P0CW19 117 aa14.48□□□□□ -0.09
HDAC6-231ENST00000488905 LIMS4P0CW20 117 aa14.48□□□□□ -0.09
HDAC6-231ENST00000488905 GZMHP20718 246 aa14.48□□□□□ -0.09
HDAC6-231ENST00000488905 RAB25P57735 213 aa14.48□□□□□ -0.09
HDAC6-231ENST00000488905 DGCR2P98153 550 aa14.48□□□□□ -0.09
HDAC6-231ENST00000488905 DDI2Q5TDH0 399 aa14.48□□□□□ -0.09
HDAC6-231ENST00000488905 XAF1Q6GPH4 301 aa14.48□□□□□ -0.09
HDAC6-231ENST00000488905 ZFP1Q6P2D0 407 aa14.48□□□□□ -0.09
HDAC6-231ENST00000488905 OR52M1Q8NGK5 317 aa14.48□□□□□ -0.09
HDAC6-231ENST00000488905 OR2T10Q8NGZ9 312 aa14.48□□□□□ -0.09
HDAC6-231ENST00000488905 OR52N1Q8NH53 320 aa14.48□□□□□ -0.09
HDAC6-231ENST00000488905 ARL11Q969Q4 196 aa14.48□□□□□ -0.09
HDAC6-231ENST00000488905 MRPS18AQ9NVS2 196 aaKnown RBP14.48□□□□□ -0.09
HDAC6-231ENST00000488905 RPL36Q9Y3U8 105 aaKnown RBP14.48□□□□□ -0.09
HDAC6-231ENST00000488905 HUWE1Q7Z6Z7 4374 aaKnown RBP14.48□□□□□ -0.09
HDAC6-231ENST00000488905 CCL24O00175 119 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 CSTBP04080 98 aaKnown RBP14.47□□□□□ -0.09
HDAC6-231ENST00000488905 RPLP1P05386 114 aaKnown RBP14.47□□□□□ -0.09
HDAC6-231ENST00000488905 VSIG8P0DPA2 414 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 SERPINA2P20848 420 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 IL3RAP26951 378 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 ZNF93P35789 620 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-231ENST00000488905 GP2P55259 537 aaKnown RBP14.47□□□□□ -0.09
HDAC6-231ENST00000488905 PPP3R1P63098 170 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 MPV17LQ2QL34 196 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 DEFB136Q30KP8 78 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 KLHL22Q53GT1 634 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 C8orf31Q8N9H6 132 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 Q8N9W7 124 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 TMEM104Q8NE00 496 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 OR8U1Q8NH10 309 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 UBALD1Q8TB05 177 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 APH1BQ8WW43 257 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 RTN4IP1Q8WWV3 396 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-231ENST00000488905 GON7Q9BXV9 100 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 TMEM138Q9NPI0 162 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 PAK1IP1Q9NWT1 392 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-231ENST00000488905 GFOD1Q9NXC2 390 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 ING4Q9UNL4 249 aa14.47□□□□□ -0.09
HDAC6-231ENST00000488905 GPR50Q13585 617 aa14.46□□□□□ -0.09
HDAC6-231ENST00000488905 PNLIPRP3Q17RR3 467 aa14.46□□□□□ -0.09
HDAC6-231ENST00000488905 CCDC58Q4VC31 144 aa14.46□□□□□ -0.09
HDAC6-231ENST00000488905 CXorf66Q5JRM2 361 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-231ENST00000488905 ATAD3CQ5T2N8 411 aa14.46□□□□□ -0.09
HDAC6-231ENST00000488905 RPL22L1Q6P5R6 122 aaKnown RBP14.46□□□□□ -0.09
HDAC6-231ENST00000488905 LCNL1Q6ZST4 164 aa14.46□□□□□ -0.09
HDAC6-231ENST00000488905 NEK7Q8TDX7 302 aa14.46□□□□□ -0.09
HDAC6-231ENST00000488905 TFAP2CQ92754 450 aa14.46□□□□□ -0.09
HDAC6-231ENST00000488905 ST6GALNAC6Q969X2 333 aa14.46□□□□□ -0.09
HDAC6-231ENST00000488905 S100A13Q99584 98 aa14.46□□□□□ -0.09
HDAC6-231ENST00000488905 C9orf16Q9BUW7 83 aa14.46□□□□□ -0.09
HDAC6-231ENST00000488905 DCLRE1BQ9H816 532 aa14.46□□□□□ -0.09
HDAC6-231ENST00000488905 IGHV3-43A0A0B4J1X8 118 aa14.45□□□□□ -0.1
HDAC6-231ENST00000488905 LOC100130705A0A1B0GUX0 176 aa14.45□□□□□ -0.1
HDAC6-231ENST00000488905 AIPO00170 330 aa14.45□□□□□ -0.1
HDAC6-231ENST00000488905 RRP9O43818 475 aaKnown RBP14.45□□□□□ -0.1
HDAC6-231ENST00000488905 ORC5O43913 435 aa14.45□□□□□ -0.1
HDAC6-231ENST00000488905 RAMP3O60896 148 aa14.45□□□□□ -0.1
HDAC6-231ENST00000488905 MOSP00540 346 aa14.45□□□□□ -0.1
HDAC6-231ENST00000488905 IGHV3-43DP0DP04 118 aa14.45□□□□□ -0.1
HDAC6-231ENST00000488905 CD1BP29016 333 aa14.45□□□□□ -0.1
HDAC6-231ENST00000488905 BDKRB2P30411 391 aa14.45□□□□□ -0.1
HDAC6-231ENST00000488905 LUMP51884 338 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-231ENST00000488905 FOXE3Q13461 319 aa14.45□□□□□ -0.1
HDAC6-231ENST00000488905 Q3ZCU0 254 aa14.45□□□□□ -0.1
HDAC6-231ENST00000488905 FAM53AQ6NSI3 398 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-231ENST00000488905 ZNF497Q6ZNH5 498 aa14.45□□□□□ -0.1
HDAC6-231ENST00000488905 RNF152Q8N8N0 203 aa14.45□□□□□ -0.1
HDAC6-231ENST00000488905 CCDC107Q8WV48 283 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms