RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 C12orf77C9JDV5 145 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 ZNF728P0DKX0 622 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 OMGP23515 440 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 DTYMKP23919 212 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 CBX5P45973 191 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 ARF6P62330 175 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 ZNF79Q15937 498 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 C11orf91Q3C1V1 193 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 METTL11BQ5VVY1 283 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 TRAT1Q6PIZ9 186 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 C5orf24Q7Z6I8 188 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 GAPTQ8N292 157 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 GVQW1Q8N7I0 195 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 ZNF565Q8N9K5 539 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 OR52I2Q8NH67 350 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 FCAMRQ8WWV6 532 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 ARL11Q969Q4 196 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 C18orf12Q96KH6 178 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 SCPEP1Q9HB40 452 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 TAF9BQ9HBM6 251 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 AKIP1Q9NQ31 210 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 POLR3KQ9Y2Y1 108 aaPredicted RBP10.14□□□□□ -0.79
TRAIP-209ENST00000488860 INSIG2Q9Y5U4 225 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 CELSR1Q9NYQ6 3014 aa10.14□□□□□ -0.79
TRAIP-209ENST00000488860 CREBBPQ92793 2442 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 TRBV6-6A0A0A6YYG2 114 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 FAM172BPA6NC97 362 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 GABARAPH6UMI1 98 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 SULT1C2O00338 296 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 SPINT2O43291 252 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 NFYBP25208 207 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 ETV6P41212 452 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 DLX1P56177 255 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 ARPC4P59998 168 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 ERVFRD-1P60508 538 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 MRPS10P82664 201 aaKnown RBP10.13□□□□□ -0.79
TRAIP-209ENST00000488860 PAX2Q02962 417 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 PRB3Q04118 309 aaPredicted RBP10.13□□□□□ -0.79
TRAIP-209ENST00000488860 HMGN3Q15651 99 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 C17orf58Q2M2W7 97 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 OR52W1Q6IF63 320 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 FAHD2BQ6P2I3 314 aaPredicted RBP10.13□□□□□ -0.79
TRAIP-209ENST00000488860 ZNF880Q6PDB4 577 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 SPNS3Q6ZMD2 512 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 ZNF782Q6ZMW2 699 aaPredicted RBP10.13□□□□□ -0.79
TRAIP-209ENST00000488860 MFSD4AQ8N468 514 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 KIR3DL3Q8N743 410 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 OR1L1Q8NH94 360 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 RFESDQ8TAC1 157 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 GPX8Q8TED1 209 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 IL1F10Q8WWZ1 152 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 S100ZQ8WXG8 99 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 CORO2AQ92828 525 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 FAHD2AQ96GK7 314 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 SOSTQ9BQB4 213 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 PCGF1Q9BSM1 259 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 SRRQ9GZT4 340 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 NCOR1P1Q9H4R4 102 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 SIRT7Q9NRC8 400 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 MBNL3Q9NUK0 354 aaKnown RBP10.13□□□□□ -0.79
TRAIP-209ENST00000488860 TAS2R3Q9NYW6 316 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 MGAT4AQ9UM21 535 aa10.13□□□□□ -0.79
TRAIP-209ENST00000488860 IGKV1D-8A0A087WSZ0 117 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 IGHV3-43A0A0B4J1X8 118 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 KIR2DS1A0A191URI9 304 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 KBTBD11-OT1A0A1B0GTJ5 212 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 hCG_1809904A0A1W2PP81 198 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 A0A1W2PPE2 198 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 A0A1W2PR64 198 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 A0A1W2PRV1 198 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 TRDCB7Z8K6 153 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 M0R1W7 72 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 SDCBPO00560 298 aaPredicted RBP10.12□□□□□ -0.79
TRAIP-209ENST00000488860 CTDSPLO15194 276 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 TPPPO94811 219 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 TOX4O94842 621 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 HBZP02008 142 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 INHBBP09529 407 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 SCTP09683 121 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 IGHV3-43DP0DP04 118 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 CD99P14209 185 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 GZMHP20718 246 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 PTBP1P26599 531 aaKnown RBP eCLIP10.12□□□□□ -0.79
TRAIP-209ENST00000488860 RCVRNP35243 200 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 GDNFP39905 211 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 KIR2DS4P43632 304 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 DLX6P56179 175 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 ZNF45Q02386 682 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 KIR2DS1Q14954 304 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 LINC00299Q6ZSB3 139 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 VMO1Q7Z5L0 202 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 HOGA1Q86XE5 327 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 Q8N402 240 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 BEST4Q8NFU0 473 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 SMIM4Q8WVI0 70 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 DACT3Q96B18 629 aaPredicted RBP10.12□□□□□ -0.79
TRAIP-209ENST00000488860 KIRREL1Q96J84 757 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 OCSTAMPQ9BR26 566 aa10.12□□□□□ -0.79
TRAIP-209ENST00000488860 WDR12Q9GZL7 423 aaKnown RBP10.12□□□□□ -0.79
TRAIP-209ENST00000488860 RAB9BQ9NP90 201 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms