RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 MBD3L4A6NDZ8 208 aaPredicted RBP11.77□□□□□ -0.53
COPS7B-221ENST00000488111 MBD3L3A6NE82 208 aaPredicted RBP11.77□□□□□ -0.53
COPS7B-221ENST00000488111 MBD3L5A6NJ08 208 aaPredicted RBP11.77□□□□□ -0.53
COPS7B-221ENST00000488111 SOCS1O15524 211 aa11.77□□□□□ -0.53
COPS7B-221ENST00000488111 C1QL1O75973 258 aa11.77□□□□□ -0.53
COPS7B-221ENST00000488111 AMY2BP19961 511 aa11.77□□□□□ -0.53
COPS7B-221ENST00000488111 RBMXP38159 391 aaKnown RBP11.77□□□□□ -0.53
COPS7B-221ENST00000488111 OR3A2P47893 321 aa11.77□□□□□ -0.53
COPS7B-221ENST00000488111 GUSBP1Q15486 140 aa11.77□□□□□ -0.53
COPS7B-221ENST00000488111 OR10S1Q8NGN2 331 aa11.77□□□□□ -0.53
COPS7B-221ENST00000488111 MBD3L2Q8NHZ7 208 aaPredicted RBP11.77□□□□□ -0.53
COPS7B-221ENST00000488111 SLAMF6Q96DU3 332 aa11.77□□□□□ -0.53
COPS7B-221ENST00000488111 ADAT3Q96EY9 351 aaPredicted RBP11.77□□□□□ -0.53
COPS7B-221ENST00000488111 SIRT7Q9NRC8 400 aa11.77□□□□□ -0.53
COPS7B-221ENST00000488111 LSM5Q9Y4Y9 91 aaKnown RBP11.77□□□□□ -0.53
COPS7B-221ENST00000488111 SPTA1P02549 2419 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 E5RGE8 158 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 H3BQ15 152 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 K7N7A8 449 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 PRH1P02810 166 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 GNALP38405 381 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 TMEM50BP56557 158 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 ERVFRD-1P60508 538 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 FBXW9Q5XUX1 488 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 TGIF2LXQ8IUE1 241 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 FGFBP3Q8TAT2 258 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 RARRES2Q99969 163 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 SOX7Q9BT81 388 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 UNKLQ9H9P5 680 aaKnown RBP11.76□□□□□ -0.53
COPS7B-221ENST00000488111 NSG2Q9Y328 171 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 GPR137BO60478 399 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 SFTPCP11686 197 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 TAGLN2P37802 199 aaKnown RBP11.76□□□□□ -0.53
COPS7B-221ENST00000488111 FAM27BQ5VT28 67 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 DEGS2Q6QHC5 323 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 ARL6IP6Q8N6S5 226 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 SEMA6DQ8NFY4 1073 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 C1orf147Q96MC9 270 aaPredicted RBP11.76□□□□□ -0.53
COPS7B-221ENST00000488111 SH3BGRL3Q9H299 93 aa11.76□□□□□ -0.53
COPS7B-221ENST00000488111 TGIF2-C20orf24A0A0A6YYL0 155 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 HSD17B6O14756 317 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 TNFSF13O75888 250 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 TRGC2P03986 189 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 FABP4P15090 132 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 TAS2R46P59540 309 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 PDZD11Q5EBL8 140 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 GGNBP1Q5YKI7 109 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 RNF133Q8WVZ7 376 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 CYYR1Q96J86 154 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 MRPL37Q9BZE1 423 aaKnown RBP11.75□□□□□ -0.53
COPS7B-221ENST00000488111 C14orf166Q9Y224 244 aaKnown RBP11.75□□□□□ -0.53
COPS7B-221ENST00000488111 SDCBPO00560 298 aaPredicted RBP11.75□□□□□ -0.53
COPS7B-221ENST00000488111 CDC14BO60729 498 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 MPIG6BO95866 241 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 H2BFMP0C1H6 154 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 GLI4P10075 376 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 EDN3P14138 238 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 IL2RGP31785 369 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 ZNF93P35789 620 aaPredicted RBP11.75□□□□□ -0.53
COPS7B-221ENST00000488111 MMP16P51512 607 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 UBE2KP61086 200 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 NUTF2P61970 127 aaKnown RBP11.75□□□□□ -0.53
COPS7B-221ENST00000488111 OR2T2Q6IF00 324 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 GLIPR1L1Q6UWM5 242 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 SLC16A14Q7RTX9 510 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.75□□□□□ -0.53
COPS7B-221ENST00000488111 MRPL24Q96A35 216 aaKnown RBP11.75□□□□□ -0.53
COPS7B-221ENST00000488111 STARD4Q96DR4 205 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 OPN3Q9H1Y3 402 aaPredicted RBP11.75□□□□□ -0.53
COPS7B-221ENST00000488111 FAM206AQ9NX38 181 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 ZNF835Q9Y2P0 537 aa11.75□□□□□ -0.53
COPS7B-221ENST00000488111 ZGRF1Q86YA3 2104 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 A8MWP6 167 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 IL18BPO95998 194 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 IFNA21P01568 189 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 TTRP02766 147 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 TRGC1P0CF51 173 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 SERPINA2P20848 420 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 GPR157Q5UAW9 335 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 RNF144BQ7Z419 303 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 BEND2Q8NDZ0 799 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 OR8G5Q8NG78 346 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 OR5D14Q8NGL3 314 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 ABHD5Q8WTS1 349 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 RAB24Q969Q5 203 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 PACRGQ96M98 296 aaPredicted RBP11.74□□□□□ -0.53
COPS7B-221ENST00000488111 SLC25A31Q9H0C2 315 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 PNRC2Q9NPJ4 139 aaKnown RBP11.74□□□□□ -0.53
COPS7B-221ENST00000488111 EHFQ9NZC4 300 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 RP1L1Q8IWN7 2480 aaPredicted RBP11.74□□□□□ -0.53
COPS7B-221ENST00000488111 DOCK7Q96N67 2140 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 RBFOX3A6NFN3 312 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 KNG1P01042 644 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 MBPP02686 304 aaPredicted RBP11.74□□□□□ -0.53
COPS7B-221ENST00000488111 SRP19P09132 144 aaKnown RBP11.74□□□□□ -0.53
COPS7B-221ENST00000488111 ZNF32P17041 273 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 GLIPR1P48060 266 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 DLK1P80370 383 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 CSNK2A3Q8NEV1 391 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 GJC3Q8NFK1 279 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms