RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 NFYBP25208 207 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 CEACAM3P40198 252 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 ARHGDIBP52566 201 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 PRRX1P54821 245 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 IL13RA2Q14627 380 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 RSU1Q15404 277 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 LIPKQ5VXJ0 399 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 Q8NFD4 153 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 OR4F17Q8NGA8 305 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 CAPSLQ8WWF8 208 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 TMEM106AQ96A25 262 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 CREB3L1Q96BA8 519 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 SMIM19Q96E16 107 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 AKR1E2Q96JD6 320 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 RBM14Q96PK6 669 aaKnown RBP9.82□□□□□ -0.84
SDC3-204ENST00000487984 OR4F4Q96R69 305 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 SLC25A33Q9BSK2 321 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 FUNDC2Q9BWH2 189 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 CALYQ9NYX4 217 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 ZNF581Q9P0T4 197 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 RSL24D1Q9UHA3 163 aaKnown RBP9.82□□□□□ -0.84
SDC3-204ENST00000487984 SSR3Q9UNL2 185 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 SIRT4Q9Y6E7 314 aaPredicted RBP9.82□□□□□ -0.84
SDC3-204ENST00000487984 KIAA2026Q5HYC2 2103 aa9.82□□□□□ -0.84
SDC3-204ENST00000487984 DNAH3Q8TD57 4116 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 SH2D7A6NKC9 451 aaPredicted RBP9.81□□□□□ -0.84
SDC3-204ENST00000487984 AIREO43918 545 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 CDRT1O95170 752 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 IL1AP01583 271 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 AMY1AP04745 511 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 AMY2AP04746 511 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 CD2P06729 351 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 LPLP06858 475 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 CD83Q01151 205 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 PAX5Q02548 391 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 ABCA11PQ4W5N1 156 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 RSBN1Q5VWQ0 802 aaPredicted RBP9.81□□□□□ -0.84
SDC3-204ENST00000487984 DMKNQ6E0U4 476 aaPredicted RBP9.81□□□□□ -0.84
SDC3-204ENST00000487984 CCDC144NLQ6NUI1 221 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 ASCL4Q6XD76 172 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 ZNF565Q8N9K5 539 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 OR5AU1Q8NGC0 362 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 OR9G1Q8NH87 305 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 PLPPR1Q8TBJ4 325 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 LEAP2Q969E1 77 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 BARHL1Q9BZE3 327 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 NCOR1P1Q9H4R4 102 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 LINC00574Q9H8X3 128 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 STUB1Q9UNE7 303 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 CEPT1Q9Y6K0 416 aa9.81□□□□□ -0.84
SDC3-204ENST00000487984 PNMA8CA0A1B0GUJ8 204 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 A0A1W2PRX2 142 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 OOSP1A8MZH6 123 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 GABARAPO95166 117 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 HTR3BO95264 441 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 LALBAP00709 142 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 IGHV3-7P01780 117 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 MNDAP41218 407 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 PPP3R1P63098 170 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 SSX1Q16384 188 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 YIF1BQ5BJH7 314 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 OXLD1Q5BKU9 147 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 TCTEX1D4Q5JR98 221 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 DDI2Q5TDH0 399 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 ZFP41Q8N8Y5 198 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 SUMF2Q8NBJ7 301 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 OR13C5Q8NGS8 318 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 RFESDQ8TAC1 157 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 MRGPRDQ8TDS7 321 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 GHSRQ92847 366 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 TOMM40LQ969M1 308 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 RPEQ96AT9 228 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 ORAI1Q96D31 301 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 DPCDQ9BVM2 203 aaPredicted RBP9.8□□□□□ -0.84
SDC3-204ENST00000487984 TMEM138Q9NPI0 162 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 IDI2-AS1Q9NZ38 188 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 IL36GQ9NZH8 169 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 ZNF281Q9Y2X9 895 aa9.8□□□□□ -0.84
SDC3-204ENST00000487984 PLXNB1O43157 2135 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 TRAV39A0A0B4J263 110 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 TRDV1A0A1B0GX56 115 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 NPIPB11E5RHQ5 1161 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 J3QR06 171 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 SLC22A1O15245 554 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 GADD45AP24522 165 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 MAPK3P27361 379 aaPredicted RBP9.79□□□□□ -0.84
SDC3-204ENST00000487984 BDKRB2P30411 391 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 SSTR5P35346 364 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 ZNF93P35789 620 aaPredicted RBP9.79□□□□□ -0.84
SDC3-204ENST00000487984 KCNJ3P48549 501 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 RBM11P57052 281 aaKnown RBP9.79□□□□□ -0.84
SDC3-204ENST00000487984 LTC4SQ16873 150 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 NHLRC3Q5JS37 347 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 CENPVQ7Z7K6 275 aaPredicted RBP9.79□□□□□ -0.84
SDC3-204ENST00000487984 OSR2Q8N2R0 312 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 PHYHIPQ92561 330 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 ISOC1Q96CN7 298 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 TMED9Q9BVK6 235 aa9.79□□□□□ -0.84
SDC3-204ENST00000487984 RBM38Q9H0Z9 239 aaKnown RBP9.79□□□□□ -0.84
SDC3-204ENST00000487984 METTL9Q9H1A3 318 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms