RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 ALDH3A2P51648 485 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 GP2P55259 537 aaKnown RBP6.73□□□□□ -1.33
PRKCB-208ENST00000487674 ZNF816Q0VGE8 651 aaPredicted RBP6.73□□□□□ -1.33
PRKCB-208ENST00000487674 EBI3Q14213 229 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 HNF4GQ14541 408 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 RSU1Q15404 277 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 LTC4SQ16873 150 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 PIGYQ3MUY2 71 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 UNQ9370/PRO34162Q6UXP9 181 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 C18orf65Q6ZTR6 163 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 LHFPL3Q86UP9 236 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 TGIF2LXQ8IUE1 241 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 ZNF695Q8IW36 515 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 STPG2Q8N412 459 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 Q8NFD4 153 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 OR51A2Q8NGJ7 313 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 RFESDQ8TAC1 157 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 PYDC1Q8WXC3 89 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 WWC2-AS2Q96NR7 200 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 PDCD1LG2Q9BQ51 273 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 DPCDQ9BVM2 203 aaPredicted RBP6.73□□□□□ -1.33
PRKCB-208ENST00000487674 FAM192AQ9GZU8 254 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 IFT22Q9H7X7 185 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 ISG20L2Q9H9L3 353 aaKnown RBP6.73□□□□□ -1.33
PRKCB-208ENST00000487674 ERVK13-1Q9NX77 482 aa6.73□□□□□ -1.33
PRKCB-208ENST00000487674 IGHV1-3A0A0C4DH29 117 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 TMEM30CPA0ZSE6 113 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 E9PI62 339 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 AP4M1O00189 453 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 CCRL2O00421 344 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 MPZL2O60487 215 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 GAPDHP04406 335 aaKnown RBP6.72□□□□□ -1.33
PRKCB-208ENST00000487674 CD2P06729 351 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 GABRB1P18505 474 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 GPR12P47775 334 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 GBX2P52951 348 aaPredicted RBP6.72□□□□□ -1.33
PRKCB-208ENST00000487674 RBM11P57052 281 aaKnown RBP6.72□□□□□ -1.33
PRKCB-208ENST00000487674 DGCR2P98153 550 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 RAB40BQ12829 278 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 ZIK1Q3SY52 487 aaPredicted RBP6.72□□□□□ -1.33
PRKCB-208ENST00000487674 NHLRC3Q5JS37 347 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 TEX38Q6PEX7 206 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 ASCL4Q6XD76 172 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 LINC00596Q86U02 117 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 SATL1Q86VE3 508 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 Q8N6K4 173 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 C8orf31Q8N9H6 132 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 SUMF2Q8NBJ7 301 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 OR52M1Q8NGK5 317 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 OR10K1Q8NGX5 313 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 OR8U1Q8NH10 309 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 RGP1Q92546 391 aaPredicted RBP6.72□□□□□ -1.33
PRKCB-208ENST00000487674 RAX2Q96IS3 184 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 Q96MT0 163 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 JAM3Q9BX67 310 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 GON7Q9BXV9 100 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 ABCG5Q9H222 651 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 LIN7CQ9NUP9 197 aaKnown RBP6.72□□□□□ -1.33
PRKCB-208ENST00000487674 FAM118AQ9NWS6 357 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 TAS2R4Q9NYW5 299 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 IL36GQ9NZH8 169 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 LINC00527Q9UJ94 153 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 GMPPBQ9Y5P6 360 aa6.72□□□□□ -1.33
PRKCB-208ENST00000487674 TRAV39A0A0B4J263 110 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 A0A1W2PPE3 182 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 NCBP2LA6PVI3 153 aaKnown RBP6.71□□□□□ -1.34
PRKCB-208ENST00000487674 C15orf65H3BRN8 121 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 CCL24O00175 119 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 SDCBPO00560 298 aaPredicted RBP6.71□□□□□ -1.34
PRKCB-208ENST00000487674 DYNC1I1O14576 645 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 RRP9O43818 475 aaKnown RBP6.71□□□□□ -1.34
PRKCB-208ENST00000487674 RAMP3O60896 148 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 OR7C1O76099 320 aaPredicted RBP6.71□□□□□ -1.34
PRKCB-208ENST00000487674 HTR3BO95264 441 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 GZMHP20718 246 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 IL3RAP26951 378 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 REG1BP48304 166 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 SOX2P48431 317 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 RAB25P57735 213 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 PPP3R1P63098 170 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 FOXE3Q13461 319 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 PNLIPRP3Q17RR3 467 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 KLHL22Q53GT1 634 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 CXorf66Q5JRM2 361 aaPredicted RBP6.71□□□□□ -1.34
PRKCB-208ENST00000487674 ZFP1Q6P2D0 407 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 MOB3BQ86TA1 216 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 CBR4Q8N4T8 237 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 LINC00311Q8N616 119 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 RNF152Q8N8N0 203 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 TMEM104Q8NE00 496 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 OR2T10Q8NGZ9 312 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 GPR148Q8TDV2 347 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 EAF1Q96JC9 268 aaPredicted RBP6.71□□□□□ -1.34
PRKCB-208ENST00000487674 MRPL18Q9H0U6 180 aaKnown RBP6.71□□□□□ -1.34
PRKCB-208ENST00000487674 PAK1IP1Q9NWT1 392 aaPredicted RBP6.71□□□□□ -1.34
PRKCB-208ENST00000487674 FAM53CQ9NYF3 392 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 ZNF581Q9P0T4 197 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 AASSQ9UDR5 926 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 ST3GAL6Q9Y274 331 aa6.71□□□□□ -1.34
PRKCB-208ENST00000487674 IGHV3-72A0A0B4J1Y9 119 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms