RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 NPIPB11E5RHQ5 1161 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 HPGDSO60760 199 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 FSHBP01225 129 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 MELTFP08582 738 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 CD3GP09693 182 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 IGHV1-8P0DP01 117 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 CDK2P24941 298 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 GLP1RP43220 463 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 MRPS15P82914 257 aaKnown RBP10.91□□□□□ -0.66
COL4A6-207ENST00000487645 PITPNAQ00169 270 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 PNLIPRP3Q17RR3 467 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 C17orf58Q2M2W7 97 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 HACD4Q5VWC8 232 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 NCR3LG1Q68D85 454 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 OR52W1Q6IF63 320 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 ZNF880Q6PDB4 577 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 RTN4RL2Q86UN3 420 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 OR4K15Q8NH41 348 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 MRGPRDQ8TDS7 321 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 CCDC107Q8WV48 283 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 BEX2Q9BXY8 128 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 NXF2Q9GZY0 626 aaKnown RBP10.91□□□□□ -0.66
COL4A6-207ENST00000487645 HEXA-AS1Q9H8Q6 139 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 C12orf4Q9NQ89 552 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 CALYQ9NYX4 217 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 KCNIP1Q9NZI2 227 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 MGAT4AQ9UM21 535 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 A3GALT2U3KPV4 340 aa10.91□□□□□ -0.66
COL4A6-207ENST00000487645 TRAV39A0A0B4J263 110 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 MEX3AA1L020 520 aaKnown RBP10.9□□□□□ -0.66
COL4A6-207ENST00000487645 INAFM1C9JVW0 142 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 CLPXO76031 633 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 TPPPO94811 219 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 EIF4EP06730 217 aaKnown RBP10.9□□□□□ -0.66
COL4A6-207ENST00000487645 RCC1P18754 421 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-207ENST00000487645 ELK1P19419 428 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 GUCA2AQ02747 115 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 ARFRP1Q13795 201 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 SRSF7Q16629 238 aaKnown RBP eCLIP10.9□□□□□ -0.66
COL4A6-207ENST00000487645 FOXB2Q5VYV0 432 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 OLFML2AQ68BL7 652 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 MOB1BQ7L9L4 216 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 MCFD2Q8NI22 146 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 TNFRSF14Q92956 283 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 ARL11Q969Q4 196 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 CYYR1Q96J86 154 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 MMP27Q9H306 513 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 ZMAT3Q9HA38 289 aaKnown RBP10.9□□□□□ -0.66
COL4A6-207ENST00000487645 CHMP1AQ9HD42 196 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-207ENST00000487645 SESN1Q9Y6P5 492 aa10.9□□□□□ -0.66
COL4A6-207ENST00000487645 CENPVL3A0A0U1RRI6 287 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 C15orf65H3BRN8 121 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 CTDSP2O14595 271 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 RGS5O15539 181 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 SPINT2O43291 252 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 SRP14P37108 136 aaKnown RBP10.89□□□□□ -0.67
COL4A6-207ENST00000487645 TALDO1P37837 337 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 UBE2E1P51965 193 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 TMEM30BQ3MIR4 351 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 CHRFAM7AQ494W8 412 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 KLF17Q5JT82 389 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-207ENST00000487645 TMEM69Q5SWH9 247 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 GPR157Q5UAW9 335 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 OR52M1Q8NGK5 317 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 OR13D1Q8NGV5 346 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 LHX4Q969G2 390 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 HDHD3Q9BSH5 251 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-207ENST00000487645 DCUN1D5Q9BTE7 237 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 AUNIPQ9H7T9 357 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 TAF9BQ9HBM6 251 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 Q9N2K0 584 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 SIRT7Q9NRC8 400 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 IDI2-AS1Q9NZ38 188 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 ADAM30Q9UKF2 790 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 NUP50Q9UKX7 468 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 MTORP42345 2549 aa10.89□□□□□ -0.67
COL4A6-207ENST00000487645 A0A087X0M5 115 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 IGHV1-69DA0A0B4J2H0 117 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 A0A1B0GX30 115 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 TMEM235A6NFC5 223 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 FAM25AB3EWG3 89 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 FAM25CB3EWG5 89 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 FAM25GB3EWG6 89 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 C12orf77C9JDV5 145 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 RNASEK-C17orf49H0YIS7 233 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 F2RL2O00254 374 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 CRLF1O75462 422 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 MMP23AO75900 390 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 IGHV1-69P01742 117 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 HOXB4P17483 251 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-207ENST00000487645 DTYMKP23919 212 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 FPR2P25090 351 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 MNDAP41218 407 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 SCGB2A2Q13296 93 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 HMGN3Q15651 99 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 HCP5Q6MZN7 132 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 RFESDQ8TAC1 157 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 KIRREL1Q96J84 757 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 TMEM133Q9H2Q1 129 aa10.88□□□□□ -0.67
COL4A6-207ENST00000487645 MIXL1Q9H2W2 232 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms