RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 IFT22Q9H7X7 185 aa22.24■■□□□ 1.15
HLA-C-208ENST00000487245 IGHG3P01860 377 aa22.24■■□□□ 1.15
HLA-C-208ENST00000487245 SUMF2Q8NBJ7 301 aa22.24■■□□□ 1.15
HLA-C-208ENST00000487245 MRPL30Q8TCC3 161 aaKnown RBP22.24■■□□□ 1.15
HLA-C-208ENST00000487245 OR51I2Q9H344 312 aa22.24■■□□□ 1.15
HLA-C-208ENST00000487245 J3QT63 122 aa22.23■■□□□ 1.15
HLA-C-208ENST00000487245 POLR2GP62487 172 aaKnown RBP eCLIP22.23■■□□□ 1.15
HLA-C-208ENST00000487245 BAXQ07812 192 aa22.23■■□□□ 1.15
HLA-C-208ENST00000487245 RNF212Q495C1 297 aa22.23■■□□□ 1.15
HLA-C-208ENST00000487245 TMEM252Q8N6L7 170 aa22.23■■□□□ 1.15
HLA-C-208ENST00000487245 IL36RNQ9UBH0 155 aa22.23■■□□□ 1.15
HLA-C-208ENST00000487245 PCNX2A6NKB5 2137 aa22.23■■□□□ 1.15
HLA-C-208ENST00000487245 ADAM20O43506 726 aa22.22■■□□□ 1.15
HLA-C-208ENST00000487245 FHITP49789 147 aa22.22■■□□□ 1.15
HLA-C-208ENST00000487245 UBE2NP61088 152 aaKnown RBP22.22■■□□□ 1.15
HLA-C-208ENST00000487245 OR2T2Q6IF00 324 aa22.22■■□□□ 1.15
HLA-C-208ENST00000487245 PCSK4Q6UW60 755 aa22.22■■□□□ 1.15
HLA-C-208ENST00000487245 TMPRSS7Q7RTY8 843 aa22.22■■□□□ 1.15
HLA-C-208ENST00000487245 CMTM1Q8IZ96 169 aa22.22■■□□□ 1.15
HLA-C-208ENST00000487245 PLPPR1Q8TBJ4 325 aa22.22■■□□□ 1.15
HLA-C-208ENST00000487245 RTL8AQ9BWD3 113 aa22.22■■□□□ 1.15
HLA-C-208ENST00000487245 NCOR1O75376 2440 aa22.22■■□□□ 1.15
HLA-C-208ENST00000487245 IFNA4P05014 189 aa22.22■■□□□ 1.15
HLA-C-208ENST00000487245 TSC22D1Q15714 1073 aa22.22■■□□□ 1.15
HLA-C-208ENST00000487245 SUMF1Q8NBK3 374 aa22.22■■□□□ 1.15
HLA-C-208ENST00000487245 CCL28Q9NRJ3 127 aa22.22■■□□□ 1.15
HLA-C-208ENST00000487245 SLC25A6P12236 298 aa22.21■■□□□ 1.15
HLA-C-208ENST00000487245 ZNF14P17017 642 aaPredicted RBP22.21■■□□□ 1.15
HLA-C-208ENST00000487245 VAMP2P63027 116 aa22.21■■□□□ 1.15
HLA-C-208ENST00000487245 TMEM182Q6ZP80 229 aaPredicted RBP22.21■■□□□ 1.15
HLA-C-208ENST00000487245 CABLES2Q9BTV7 478 aa22.21■■□□□ 1.15
HLA-C-208ENST00000487245 EIF5A2Q9GZV4 153 aaKnown RBP22.21■■□□□ 1.15
HLA-C-208ENST00000487245 SLC35B3Q9H1N7 401 aa22.21■■□□□ 1.15
HLA-C-208ENST00000487245 CDH20Q9HBT6 801 aa22.21■■□□□ 1.15
HLA-C-208ENST00000487245 CLCF1Q9UBD9 225 aa22.21■■□□□ 1.15
HLA-C-208ENST00000487245 BTBD17A6NE02 478 aa22.2■■□□□ 1.14
HLA-C-208ENST00000487245 C1QL1O75973 258 aa22.2■■□□□ 1.14
HLA-C-208ENST00000487245 HOXB1P14653 301 aaPredicted RBP22.2■■□□□ 1.14
HLA-C-208ENST00000487245 CA6P23280 308 aa22.2■■□□□ 1.14
HLA-C-208ENST00000487245 ATP6V0CP27449 155 aa22.2■■□□□ 1.14
HLA-C-208ENST00000487245 Q8IYB0 196 aa22.2■■□□□ 1.14
HLA-C-208ENST00000487245 NPIPB11E5RHQ5 1161 aa22.2■■□□□ 1.14
HLA-C-208ENST00000487245 PROB1E7EW31 1015 aa22.2■■□□□ 1.14
HLA-C-208ENST00000487245 HSPA12AO43301 675 aa22.2■■□□□ 1.14
HLA-C-208ENST00000487245 LILRA1O75019 489 aa22.2■■□□□ 1.14
HLA-C-208ENST00000487245 AWAT1Q58HT5 328 aa22.2■■□□□ 1.14
HLA-C-208ENST00000487245 CXorf66Q5JRM2 361 aaPredicted RBP22.2■■□□□ 1.14
HLA-C-208ENST00000487245 ZNF324BQ6AW86 544 aaPredicted RBP22.2■■□□□ 1.14
HLA-C-208ENST00000487245 C5orf24Q7Z6I8 188 aa22.2■■□□□ 1.14
HLA-C-208ENST00000487245 CLCC1Q96S66 551 aa22.2■■□□□ 1.14
HLA-C-208ENST00000487245 RPS10P5Q9NQ39 176 aa22.2■■□□□ 1.14
HLA-C-208ENST00000487245 C7orf77A4D0Y5 90 aa22.19■■□□□ 1.14
HLA-C-208ENST00000487245 SSSCA1O60232 199 aa22.19■■□□□ 1.14
HLA-C-208ENST00000487245 PGLYRP1O75594 196 aaPredicted RBP22.19■■□□□ 1.14
HLA-C-208ENST00000487245 FTH1P19P0C7X4 201 aa22.19■■□□□ 1.14
HLA-C-208ENST00000487245 S100GP29377 79 aa22.19■■□□□ 1.14
HLA-C-208ENST00000487245 HLA-DRB3P79483 266 aa22.19■■□□□ 1.14
HLA-C-208ENST00000487245 RHEBQ15382 184 aa22.19■■□□□ 1.14
HLA-C-208ENST00000487245 IGFL2Q6UWQ7 119 aa22.19■■□□□ 1.14
HLA-C-208ENST00000487245 ODF3L1Q8IXM7 274 aa22.19■■□□□ 1.14
HLA-C-208ENST00000487245 H1FOOQ8IZA3 346 aaPredicted RBP22.19■■□□□ 1.14
HLA-C-208ENST00000487245 FAM213BQ8TBF2 198 aa22.19■■□□□ 1.14
HLA-C-208ENST00000487245 HIST1H2BAQ96A08 127 aa22.19■■□□□ 1.14
HLA-C-208ENST00000487245 C14orf79Q96F83 325 aa22.19■■□□□ 1.14
HLA-C-208ENST00000487245 HIPK2Q9H2X6 1198 aa22.19■■□□□ 1.14
HLA-C-208ENST00000487245 OR51B6Q9H340 312 aa22.19■■□□□ 1.14
HLA-C-208ENST00000487245 ESRP2Q9H6T0 727 aaKnown RBP22.19■■□□□ 1.14
HLA-C-208ENST00000487245 TRAV24A0A0B4J272 114 aa22.18■■□□□ 1.14
HLA-C-208ENST00000487245 LRP5LA4QPB2 252 aa22.18■■□□□ 1.14
HLA-C-208ENST00000487245 HSD17B6O14756 317 aa22.18■■□□□ 1.14
HLA-C-208ENST00000487245 NKX2-8O15522 239 aa22.18■■□□□ 1.14
HLA-C-208ENST00000487245 CNOT4O95628 575 aaKnown RBP22.18■■□□□ 1.14
HLA-C-208ENST00000487245 MT-ND4LP03901 98 aa22.18■■□□□ 1.14
HLA-C-208ENST00000487245 CEACAM1P13688 526 aa22.18■■□□□ 1.14
HLA-C-208ENST00000487245 MDH2P40926 338 aaKnown RBP22.18■■□□□ 1.14
HLA-C-208ENST00000487245 CCL11P51671 97 aa22.18■■□□□ 1.14
HLA-C-208ENST00000487245 RAB5BP61020 215 aa22.18■■□□□ 1.14
HLA-C-208ENST00000487245 PPP1CBP62140 327 aa22.18■■□□□ 1.14
HLA-C-208ENST00000487245 OR8G1Q15617 311 aa22.18■■□□□ 1.14
HLA-C-208ENST00000487245 SP5Q6BEB4 398 aaPredicted RBP22.18■■□□□ 1.14
HLA-C-208ENST00000487245 INO80CQ6PI98 192 aaPredicted RBP22.18■■□□□ 1.14
HLA-C-208ENST00000487245 OR2G3Q8NGZ4 309 aa22.18■■□□□ 1.14
HLA-C-208ENST00000487245 GNPNAT1Q96EK6 184 aaPredicted RBP22.18■■□□□ 1.14
HLA-C-208ENST00000487245 OR2W1Q9Y3N9 320 aa22.18■■□□□ 1.14
HLA-C-208ENST00000487245 DEGS1O15121 323 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 SELEP16581 610 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 F2RP25116 425 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 PMP22Q01453 160 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 DEFB124Q8NES8 71 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 TMEM171Q8WVE6 324 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 ZNF488Q96MN9 340 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 COA4Q9NYJ1 87 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 DLL3Q9NYJ7 618 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 TREM2Q9NZC2 230 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 POLDIP2Q9Y2S7 368 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 BDP1A6H8Y1 2624 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 ARID1AO14497 2285 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 ZNF98A6NK75 572 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 HSPB6O14558 160 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 SMPD2O60906 423 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms