RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 NSDHLQ15738 373 aa9.15□□□□□ -0.94
CCDC171-208ENST00000486641 FBXW9Q5XUX1 488 aa9.15□□□□□ -0.94
CCDC171-208ENST00000486641 ZNF441Q8N8Z8 693 aa9.15□□□□□ -0.94
CCDC171-208ENST00000486641 NEK7Q8TDX7 302 aa9.15□□□□□ -0.94
CCDC171-208ENST00000486641 C20orf144Q9BQM9 153 aa9.15□□□□□ -0.94
CCDC171-208ENST00000486641 WNT5BQ9H1J7 359 aa9.15□□□□□ -0.94
CCDC171-208ENST00000486641 IGKV1-12A0A0C4DH73 117 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 YPEL1O60688 119 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 TNFSF13O75888 250 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 IGKV1D-12P01611 117 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 GCH1P30793 250 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 PRSS12P56730 875 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 RPS18P62269 152 aaKnown RBP9.15□□□□□ -0.95
CCDC171-208ENST00000486641 MEF2BQ02080 365 aaPredicted RBP9.15□□□□□ -0.95
CCDC171-208ENST00000486641 ARL16Q0P5N6 197 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 ENDOGQ14249 297 aaKnown RBP9.15□□□□□ -0.95
CCDC171-208ENST00000486641 TESK1Q15569 626 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 GAPTQ8N292 157 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 OR1N1Q8NGS0 311 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 POC1BQ8TC44 478 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 ANAPC16Q96DE5 110 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 YPEL2Q96QA6 119 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 PARLQ9H300 379 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 PLSCR2Q9NRY7 297 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 SOHLH2Q9NX45 425 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 COPS7AQ9UBW8 275 aa9.15□□□□□ -0.95
CCDC171-208ENST00000486641 A0A0G2JRQ6 117 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 A0A1W2PNR3 127 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 B4DGG1 531 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 NTSR1P30989 418 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 SRP14P37108 136 aaKnown RBP9.14□□□□□ -0.95
CCDC171-208ENST00000486641 RPL15P61313 204 aaKnown RBP9.14□□□□□ -0.95
CCDC171-208ENST00000486641 C17orf67Q0P5P2 114 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 HIST3H3Q16695 136 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 SNAI3Q3KNW1 292 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 TOMM20LQ6UXN7 152 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 Q6ZSR3 168 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 LHX4Q969G2 390 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 PLK3Q9H4B4 646 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 ST3GAL6Q9Y274 331 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 TRAPPC1Q9Y5R8 145 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 ARHGAP21Q5T5U3 1957 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 IGHV5-51A0A0C4DH38 117 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 CNOT4O95628 575 aaKnown RBP9.14□□□□□ -0.95
CCDC171-208ENST00000486641 GYPAP02724 150 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 UCP1P25874 307 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 YPEL5P62699 121 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 PRDX4Q13162 271 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 TMEM41BQ5BJD5 291 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 WDR5BQ86VZ2 330 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 OSR2Q8N2R0 312 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 MRPL30Q8TCC3 161 aaKnown RBP9.14□□□□□ -0.95
CCDC171-208ENST00000486641 HLA-CQ95604 372 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 IMMP2LQ96T52 175 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 PSMG3Q9BT73 122 aaPredicted RBP9.14□□□□□ -0.95
CCDC171-208ENST00000486641 RPP25Q9BUL9 199 aaKnown RBP9.14□□□□□ -0.95
CCDC171-208ENST00000486641 REPIN1Q9BWE0 567 aaKnown RBP9.14□□□□□ -0.95
CCDC171-208ENST00000486641 DNAJC4Q9NNZ3 241 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 TMEM106BQ9NUM4 274 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 RNF150Q9ULK6 438 aa9.14□□□□□ -0.95
CCDC171-208ENST00000486641 THADAQ6YHU6 1953 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 KNL1Q8NG31 2342 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 SPAG17Q6Q759 2223 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 IGKV1D-13A0A0B4J2D9 117 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 DUXBA0A1W2PPF3 345 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 KIAA1324LA8MWY0 1029 aaPredicted RBP9.13□□□□□ -0.95
CCDC171-208ENST00000486641 HMGB3O15347 200 aaKnown RBP9.13□□□□□ -0.95
CCDC171-208ENST00000486641 UMODP07911 640 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 IGKV1-13P0DP09 117 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 HOXB2P14652 356 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 IL3RAP26951 378 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 IZUMO4Q1ZYL8 232 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 ACSF3Q4G176 576 aaPredicted RBP9.13□□□□□ -0.95
CCDC171-208ENST00000486641 TMEM211Q6ICI0 200 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 TEX43Q6ZNM6 134 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 Q6ZWC4 215 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 NUFIP2Q7Z417 695 aaKnown RBP9.13□□□□□ -0.95
CCDC171-208ENST00000486641 YAF2Q8IY57 180 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 C11orf42Q8N5U0 333 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 ZNF525Q8N782 197 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 OR5T1Q8NG75 326 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 OR2AE1Q8NHA4 323 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 THAP3Q8WTV1 239 aaPredicted RBP9.13□□□□□ -0.95
CCDC171-208ENST00000486641 GATAD1Q8WUU5 269 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 C10orf35Q96D05 121 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 MANBALQ9NQG1 85 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 SLC39A9Q9NUM3 307 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 ZFP30Q9Y2G7 519 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 PAM16Q9Y3D7 125 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 SEC16AO15027 2179 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 SPEGQ15772 3267 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 COL5A1P20908 1838 aaPredicted RBP9.13□□□□□ -0.95
CCDC171-208ENST00000486641 A0A0U1RQK1 487 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 ZNF320A2RRD8 509 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 IGKV1D-33P01593 117 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 IGKV1-33P01594 117 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 TCN2P20062 427 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 CHRNA7P36544 502 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 RAB7AP51149 207 aa9.13□□□□□ -0.95
CCDC171-208ENST00000486641 GFERP55789 205 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms