RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 MRPL24Q96A35 216 aaKnown RBP7.74□□□□□ -1.17
GABRE-209ENST00000486255 SARAFQ96BY9 339 aa7.74□□□□□ -1.17
GABRE-209ENST00000486255 ABHD1Q96SE0 405 aa7.74□□□□□ -1.17
GABRE-209ENST00000486255 RCC1P18754 421 aaPredicted RBP7.73□□□□□ -1.17
GABRE-209ENST00000486255 TMEM183AQ8IXX5 376 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 MRAP2Q96G30 205 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 C4orf45Q96LM5 186 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 RASL11BQ9BPW5 248 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 PEF1Q9UBV8 284 aaKnown RBP7.73□□□□□ -1.17
GABRE-209ENST00000486255 ZNF236Q9UL36 1845 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 ETHE1O95571 254 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 IGLV3-25P01717 112 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 SEC11BP0C7V7 166 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 LGALS7P47929 136 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 RPS4XP62701 263 aaKnown RBP7.73□□□□□ -1.17
GABRE-209ENST00000486255 YBX1P67809 324 aaKnown RBP7.73□□□□□ -1.17
GABRE-209ENST00000486255 HOXA4Q00056 320 aaPredicted RBP7.73□□□□□ -1.17
GABRE-209ENST00000486255 MRPL43Q8N983 215 aaKnown RBP7.73□□□□□ -1.17
GABRE-209ENST00000486255 ZNF418Q8TF45 676 aaPredicted RBP7.73□□□□□ -1.17
GABRE-209ENST00000486255 MT-CO3P00414 261 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 FOLR2P14207 255 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 PPP1CCP36873 323 aaKnown RBP7.73□□□□□ -1.17
GABRE-209ENST00000486255 CXXC4Q9H2H0 198 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 ELF5Q9UKW6 265 aaPredicted RBP7.73□□□□□ -1.17
GABRE-209ENST00000486255 MMP17Q9ULZ9 603 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 SIGLEC7Q9Y286 467 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 ARID2Q68CP9 1835 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 A0A0B4J2E0 115 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 A0A1B0GX12 115 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 RBFOX2O43251 390 aaKnown RBP eCLIP7.73□□□□□ -1.171e-6■■□□□ 11.6
GABRE-209ENST00000486255 OTX1P32242 354 aaPredicted RBP7.73□□□□□ -1.17
GABRE-209ENST00000486255 NKG7Q16617 165 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 ALKBH3Q96Q83 286 aaPredicted RBP7.73□□□□□ -1.17
GABRE-209ENST00000486255 PCGF1Q9BSM1 259 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 RBM38Q9H0Z9 239 aaKnown RBP7.73□□□□□ -1.17
GABRE-209ENST00000486255 ID4P47928 161 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 FZD5Q13467 585 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 KLF9Q13886 244 aaPredicted RBP7.73□□□□□ -1.17
GABRE-209ENST00000486255 SGMS2Q8NHU3 365 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 RFESDQ8TAC1 157 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 ZNF707Q96C28 371 aaPredicted RBP7.73□□□□□ -1.17
GABRE-209ENST00000486255 GPR27Q9NS67 375 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 WNT16Q9UBV4 365 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 OPN4Q9UHM6 478 aa7.73□□□□□ -1.17
GABRE-209ENST00000486255 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.72□□□□□ -1.17
GABRE-209ENST00000486255 hADV38S2A0JD32 116 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 SHISA8B8ZZ34 492 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 ZFPL1O95159 310 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 OR4A8P0C604 315 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 EPHA8P29322 1005 aaPredicted RBP7.72□□□□□ -1.17
GABRE-209ENST00000486255 MMP16P51512 607 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 TMEM50BP56557 158 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 ARF6P62330 175 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 ACVR1Q04771 509 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 SLC23A3Q6PIS1 610 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 GAPTQ8N292 157 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 LRRC29Q8WV35 223 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 SMDT1Q9H4I9 107 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 TNFSF18Q9UNG2 199 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 VSIG4Q9Y279 399 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 AUP1Q9Y679 476 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 MTCH2Q9Y6C9 303 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 NKX2-6A6NCS4 301 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 GNG7O60262 68 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 MT-ND6P03923 174 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 WDR25Q64LD2 544 aaPredicted RBP7.72□□□□□ -1.17
GABRE-209ENST00000486255 CYB561D1Q8N8Q1 229 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 ZBP1Q9H171 429 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 PCOLCE2Q9UKZ9 415 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 OTOFQ9HC10 1997 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 A0A1B0GTH9 108 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 IGHV4-34P06331 123 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 COX7A1P24310 79 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 FMODQ06828 376 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 ZNF273Q14593 569 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 DEFB109BQ30KR1 87 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 SH2D5Q6ZV89 423 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 FAM219AQ8IW50 185 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 H1FOOQ8IZA3 346 aaPredicted RBP7.72□□□□□ -1.17
GABRE-209ENST00000486255 Q8WTZ3 238 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 CHRNA10Q9GZZ6 450 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 PARLQ9H300 379 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 RAXQ9Y2V3 346 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 NDUFS8O00217 210 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 BCL2P10415 239 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 KIR3DL2P43630 455 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 C1orf53Q5VUE5 145 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 ZNF770Q6IQ21 691 aaPredicted RBP7.72□□□□□ -1.17
GABRE-209ENST00000486255 NRIP2Q9BQI9 281 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 PAXXQ9BUH6 204 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 GGACTQ9BVM4 153 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 ASPDHA6ND91 283 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 LEPROTL1O95214 131 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 ZGLP1P0C6A0 271 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 FAM53AQ6NSI3 398 aaPredicted RBP7.72□□□□□ -1.17
GABRE-209ENST00000486255 PWWP2BQ6NUJ5 590 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 TEPPQ6URK8 271 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 OR8I2Q8N0Y5 310 aa7.72□□□□□ -1.17
GABRE-209ENST00000486255 TP53I13Q8NBR0 393 aaPredicted RBP7.72□□□□□ -1.17
GABRE-209ENST00000486255 ZG16BQ96DA0 208 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms