RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 A0A0G2JNJ9 132 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 MPTX1A8MV57 137 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 M0R1B8 84 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 BET1O15155 118 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 RLN2P04090 185 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 GRPP07492 148 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 ADH4P08319 380 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 HOXB5P09067 269 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 PTAFRP25105 342 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 ZNF83P51522 516 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 EIF5AP63241 154 aaKnown RBP10.09□□□□□ -0.79
PKP4-213ENST00000486254 RAB32Q13637 225 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 PHLDA2Q53GA4 152 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 OR5D13Q8NGL4 314 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 ERGIC1Q969X5 290 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 MRPL24Q96A35 216 aaKnown RBP10.09□□□□□ -0.79
PKP4-213ENST00000486254 NCOR1P1Q9H4R4 102 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 PLEKHA2Q9HB19 425 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 LUZP4Q9P127 313 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 Q9UFV3 132 aa10.09□□□□□ -0.79
PKP4-213ENST00000486254 FRYQ5TBA9 3013 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 CELSR3Q9NYQ7 3312 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 CADP27708 2225 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 RP1L1Q8IWN7 2480 aaPredicted RBP10.08□□□□□ -0.8
PKP4-213ENST00000486254 A6NLC8 198 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 C16orf97H3BN30 126 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 SIRPB1O00241 398 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 HSPB6O14558 160 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 PHF1O43189 567 aaPredicted RBP10.08□□□□□ -0.8
PKP4-213ENST00000486254 HEXAP06865 529 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 SLC25A6P12236 298 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 TPT1P13693 172 aaKnown RBP10.08□□□□□ -0.8
PKP4-213ENST00000486254 RCC1P18754 421 aaPredicted RBP10.08□□□□□ -0.8
PKP4-213ENST00000486254 CD40P25942 277 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 SELENOVP59797 346 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 C6orf183Q5T699 404 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 TMEM108Q6UXF1 575 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 ZNF818PQ6ZRF7 136 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 CISD2Q8N5K1 135 aaKnown RBP10.08□□□□□ -0.8
PKP4-213ENST00000486254 FAM71E2Q8N5Q1 922 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 ZBTB34Q8NCN2 500 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 SECTM1Q8WVN6 248 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 VKORC1Q9BQB6 163 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 DNTTIP1Q9H147 329 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 CEP295Q9C0D2 2601 aa10.08□□□□□ -0.8
PKP4-213ENST00000486254 IGKV1D-13A0A0B4J2D9 117 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 OOEPA6NGQ2 149 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 E5RGE8 158 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 GAPDHP04406 335 aaKnown RBP10.07□□□□□ -0.8
PKP4-213ENST00000486254 IGKV1-13P0DP09 117 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 VDAC1P21796 283 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 BMP5P22003 454 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 LUMP51884 338 aaPredicted RBP10.07□□□□□ -0.8
PKP4-213ENST00000486254 LCE2DQ5TA82 110 aaPredicted RBP10.07□□□□□ -0.8
PKP4-213ENST00000486254 TBC1D26Q86UD7 250 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 EIF4E3Q8N5X7 224 aaKnown RBP10.07□□□□□ -0.8
PKP4-213ENST00000486254 OR10V1Q8NGI7 309 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 OR11L1Q8NGX0 322 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 OR1S1Q8NH92 325 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 PPP1R35Q8TAP8 253 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 SNRNP40Q96DI7 357 aaKnown RBP10.07□□□□□ -0.8
PKP4-213ENST00000486254 RRNAD1Q96FB5 475 aaKnown RBP10.07□□□□□ -0.8
PKP4-213ENST00000486254 TP53RKQ96S44 253 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 ZNF471Q9BX82 626 aaPredicted RBP10.07□□□□□ -0.8
PKP4-213ENST00000486254 MSL2Q9HCI7 577 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 FAM212BQ9NTI7 297 aaPredicted RBP10.07□□□□□ -0.8
PKP4-213ENST00000486254 PRR13Q9NZ81 148 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 KCNIP1Q9NZI2 227 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 OR5AC2Q9NZP5 309 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 TRAPPC2LQ9UL33 140 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 ZDHHC8Q9ULC8 765 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 NSG2Q9Y328 171 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 PLCE1Q9P212 2302 aa10.07□□□□□ -0.8
PKP4-213ENST00000486254 ZSCAN5BA6NJL1 495 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 F5H0A9 414 aaPredicted RBP10.06□□□□□ -0.8
PKP4-213ENST00000486254 PSPNO60542 156 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 SPDEFO95238 335 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 F2RP25116 425 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 OR3A1P47881 315 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 ATXN7L3Q14CW9 347 aaPredicted RBP10.06□□□□□ -0.8
PKP4-213ENST00000486254 TESK1Q15569 626 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 MSMPQ1L6U9 139 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 CR1LQ2VPA4 569 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 GPR157Q5UAW9 335 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 ALKAL2Q6UX46 152 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 PDZD9Q8IXQ8 264 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 SLC35G3Q8N808 338 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 RELL2Q8NC24 303 aaPredicted RBP10.06□□□□□ -0.8
PKP4-213ENST00000486254 OR4D5Q8NGN0 318 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 ANGPTL6Q8NI99 470 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 Q8TCH9 128 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 RBPMSQ93062 196 aaKnown RBP10.06□□□□□ -0.8
PKP4-213ENST00000486254 MEGF10Q96KG7 1140 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 LURAP1Q96LR2 239 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 DMRTA2Q96SC8 542 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 DIRC2Q96SL1 478 aa10.06□□□□□ -0.8
PKP4-213ENST00000486254 RNF212BA8MTL3 300 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 ST8SIA3O43173 380 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 ZNF737O75373 536 aa10.05□□□□□ -0.8
PKP4-213ENST00000486254 PGLYRP1O75594 196 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms