RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 C17orf98A8MV24 154 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 SPINT2O43291 252 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 AVPP01185 164 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 MMP9P14780 707 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 SRD5A1P18405 259 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 PRTN3P24158 256 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 MNDAP41218 407 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 TMEM50BP56557 158 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 GNG2P59768 71 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 CDNFQ49AH0 187 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 PLAC9Q5JTB6 97 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 TMEM69Q5SWH9 247 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 OR52W1Q6IF63 320 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 ZNF782Q6ZMW2 699 aaPredicted RBP9.35□□□□□ -0.91
NUP50-216ENST00000486184 TCF23Q7RTU1 214 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 PRR18Q8N4B5 295 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 OR13D1Q8NGV5 346 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 MRPL30Q8TCC3 161 aaKnown RBP9.35□□□□□ -0.91
NUP50-216ENST00000486184 DGCR14Q96DF8 476 aaKnown RBP9.35□□□□□ -0.91
NUP50-216ENST00000486184 TBX15Q96SF7 602 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 DCUN1D5Q9BTE7 237 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 C6orf62Q9GZU0 229 aaPredicted RBP9.35□□□□□ -0.91
NUP50-216ENST00000486184 ABCG5Q9H222 651 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 ZMAT3Q9HA38 289 aaKnown RBP9.35□□□□□ -0.91
NUP50-216ENST00000486184 OPN4Q9UHM6 478 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 MGAT4AQ9UM21 535 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 SESN1Q9Y6P5 492 aa9.35□□□□□ -0.91
NUP50-216ENST00000486184 ZNF469Q96JG9 3925 aaPredicted RBP9.35□□□□□ -0.91
NUP50-216ENST00000486184 MFNGO00587 321 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 ORC5O43913 435 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 HPGDSO60760 199 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 APOA1P02647 267 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 GSTP1P09211 210 aaKnown RBP9.34□□□□□ -0.91
NUP50-216ENST00000486184 IGHV1-8P0DP01 117 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 COX7A1P24310 79 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 CDK2P24941 298 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 NFYBP25208 207 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 SSTR5P35346 364 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 DLX6P56179 175 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 PRR20EP86478 221 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 PRR20CP86479 221 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 PRR20DP86480 221 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 PRR20BP86481 221 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 PRR20AP86496 221 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 PITPNAQ00169 270 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 PRAMEF5Q5TYX0 476 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 HEPN1Q6WQI6 88 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 PDZD9Q8IXQ8 264 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 Q8N7P7 452 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 MCFD2Q8NI22 146 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 ARL11Q969Q4 196 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 MS4A7Q9GZW8 240 aaPredicted RBP9.34□□□□□ -0.91
NUP50-216ENST00000486184 IDI2-AS1Q9NZ38 188 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 NUP50Q9UKX7 468 aa9.34□□□□□ -0.91
NUP50-216ENST00000486184 IGHV3OR16-10A0A075B7F0 116 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 TMEM235A6NFC5 223 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 POM121CA8CG34 1229 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 XRCC3O43542 346 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 NAPSAO96009 420 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 EIF4EP06730 217 aaKnown RBP9.33□□□□□ -0.92
NUP50-216ENST00000486184 HOXB4P17483 251 aaPredicted RBP9.33□□□□□ -0.92
NUP50-216ENST00000486184 RCC1P18754 421 aaPredicted RBP9.33□□□□□ -0.92
NUP50-216ENST00000486184 OMGP23515 440 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 FPR2P25090 351 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 LGALS4P56470 323 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 BPIFB3P59826 476 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 KLRD1Q13241 179 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 LTC4SQ16873 150 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 PNLIPRP3Q17RR3 467 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 TMEM30BQ3MIR4 351 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 HACD4Q5VWC8 232 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 OLFML2AQ68BL7 652 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 C1orf229Q6ZS94 237 aaPredicted RBP9.33□□□□□ -0.92
NUP50-216ENST00000486184 ZNF554Q86TJ5 538 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 RTN4RL2Q86UN3 420 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 IZUMO1Q8IYV9 350 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 GAPTQ8N292 157 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 PNKDQ8N490 385 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 OR10A7Q8NGE5 316 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 RFESDQ8TAC1 157 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 HDHD3Q9BSH5 251 aaPredicted RBP9.33□□□□□ -0.92
NUP50-216ENST00000486184 SUCNR1Q9BXA5 334 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 TMEM133Q9H2Q1 129 aa9.33□□□□□ -0.92
NUP50-216ENST00000486184 UNKLQ9H9P5 680 aaKnown RBP9.33□□□□□ -0.92
NUP50-216ENST00000486184 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.33□□□□□ -0.92
NUP50-216ENST00000486184 TRBV6-6A0A0A6YYG2 114 aa9.32□□□□□ -0.92
NUP50-216ENST00000486184 IGHV1-69DA0A0B4J2H0 117 aa9.32□□□□□ -0.92
NUP50-216ENST00000486184 CENPVL3A0A0U1RRI6 287 aa9.32□□□□□ -0.92
NUP50-216ENST00000486184 A0A1W2PRD5 423 aa9.32□□□□□ -0.92
NUP50-216ENST00000486184 A0A1W2PRF3 423 aa9.32□□□□□ -0.92
NUP50-216ENST00000486184 A0A1W2PRM7 423 aa9.32□□□□□ -0.92
NUP50-216ENST00000486184 C12orf77C9JDV5 145 aa9.32□□□□□ -0.92
NUP50-216ENST00000486184 RNASEK-C17orf49H0YIS7 233 aa9.32□□□□□ -0.92
NUP50-216ENST00000486184 SDCBPO00560 298 aaPredicted RBP9.32□□□□□ -0.92
NUP50-216ENST00000486184 TOR1AO14656 332 aa9.32□□□□□ -0.92
NUP50-216ENST00000486184 CRLF1O75462 422 aa9.32□□□□□ -0.92
NUP50-216ENST00000486184 IGHV1-69P01742 117 aa9.32□□□□□ -0.92
NUP50-216ENST00000486184 IGHV4-38-2P0DP08 117 aa9.32□□□□□ -0.92
NUP50-216ENST00000486184 ELK1P19419 428 aa9.32□□□□□ -0.92
NUP50-216ENST00000486184 EPHA1P21709 976 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms